RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ALDH6A1Q02252 535 aaKnown RBP10.95□□□□□ -0.66
CLCN6-202ENST00000346436 SH3PXD2AQ5TCZ1 1133 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 RFWD3Q6PCD5 774 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 GALNT13Q8IUC8 556 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 SPATA6LQ8N4H0 392 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 HCAR2Q8TDS4 363 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 C12orf42Q96LP6 360 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 TTLL2Q9BWV7 592 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 SLC2A4RGQ9NR83 387 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 GNPTGQ9UJJ9 305 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 C5orf60A6NFR6 353 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 H3BNH8 94 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 VNN1O95497 513 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 GOT1P17174 413 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 SMPD1P17405 629 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 AGXTP21549 392 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 RRM2P31350 389 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 DMC1Q14565 340 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 C16orf87Q6PH81 154 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 RINLQ6ZS11 566 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 SNX32Q86XE0 403 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 NDRG1Q92597 394 aaKnown RBP10.95□□□□□ -0.66
CLCN6-202ENST00000346436 FERD3LQ96RJ6 166 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 ZNF184Q99676 751 aaPredicted RBP10.95□□□□□ -0.66
CLCN6-202ENST00000346436 NUSAP1Q9BXS6 441 aaKnown RBP10.95□□□□□ -0.66
CLCN6-202ENST00000346436 PIF1Q9H611 641 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 NUDT5Q9UKK9 219 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 HEMK1Q9Y5R4 338 aaPredicted RBP10.95□□□□□ -0.66
CLCN6-202ENST00000346436 PEX12O00623 359 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 PIM1P11309 404 aaPredicted RBP10.95□□□□□ -0.66
CLCN6-202ENST00000346436 PTPN9P43378 593 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 C1QTNF8P60827 252 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 SPRED3Q2MJR0 410 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 LUZP2Q86TE4 346 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 ADNPQ9H2P0 1102 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 RHBGQ9H310 441 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 PRR5-ARHGAP8B1AHC4 643 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 THRAP10827 490 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 DPP6P42658 865 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 NRIP1P48552 1158 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 SEC13P55735 322 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 ARHGAP8P85298 464 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 HSDL1Q3SXM5 330 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 BRMS1LQ5PSV4 323 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 RNASEH2BQ5TBB1 312 aaKnown RBP10.95□□□□□ -0.66
CLCN6-202ENST00000346436 C11orf74Q86VG3 221 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 DENND2DQ9H6A0 471 aaPredicted RBP10.95□□□□□ -0.66
CLCN6-202ENST00000346436 IL23AQ9NPF7 189 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 OR10H1Q9Y4A9 318 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 CHADO15335 359 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 TREHO43280 583 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 SMNDC1O75940 238 aaKnown RBP eCLIP10.95□□□□□ -0.66
CLCN6-202ENST00000346436 CYP1A1P04798 512 aaPredicted RBP10.95□□□□□ -0.66
CLCN6-202ENST00000346436 TPBGLP0DKB5 382 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 GPD2P43304 727 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 PPP1R26Q5T8A7 1209 aaPredicted RBP10.95□□□□□ -0.66
CLCN6-202ENST00000346436 PAGE2Q7Z2X7 111 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 ANKLE1Q8NAG6 615 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 ADI1Q9BV57 179 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 PHACTR1Q9C0D0 580 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 SEMA6AQ9H2E6 1030 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 KCNK4Q9NYG8 393 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 ARHGAP28Q9P2N2 729 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 NUP98P52948 1817 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 CRYBG1Q9Y4K1 1723 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 TCRBV7S3A2A0A539 114 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 CCR4P51679 360 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 CYP1B1Q16678 543 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 CMC1Q7Z7K0 106 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 KCNMB4Q86W47 210 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 SLC22A9Q8IVM8 553 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 SNRNP27Q8WVK2 155 aaKnown RBP10.94□□□□□ -0.66
CLCN6-202ENST00000346436 CDRT15Q96T59 188 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 TMEM109Q9BVC6 243 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 ARHGAP39Q9C0H5 1083 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 CNGB3Q9NQW8 809 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 RHBDL2Q9NX52 303 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 SLC12A4Q9UP95 1085 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 IL2P60568 153 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 MRPS22P82650 360 aaKnown RBP10.94□□□□□ -0.66
CLCN6-202ENST00000346436 BIKQ13323 160 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 CELF5Q8N6W0 485 aaKnown RBP10.94□□□□□ -0.66
CLCN6-202ENST00000346436 SH3GL1Q99961 368 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 NRDE2Q9H7Z3 1164 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 PNPOQ9NVS9 261 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 SGTAO43765 313 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 PGAM1P18669 254 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 GP5P40197 560 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 WASP42768 502 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 HADHBP55084 474 aaKnown RBP10.94□□□□□ -0.66
CLCN6-202ENST00000346436 SLC9A5Q14940 896 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 CRY1Q16526 586 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 CYP2R1Q6VVX0 501 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 RNF168Q8IYW5 571 aaPredicted RBP10.94□□□□□ -0.66
CLCN6-202ENST00000346436 CATSPER1Q8NEC5 780 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 GSTCDQ8NEC7 633 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 LRMDAQ9H2I8 198 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 CAB39LQ9H9S4 337 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 GPAMQ9HCL2 828 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 TRMT13Q9NUP7 481 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms