RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 S1PR4O95977 384 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 MRPS35P82673 323 aaKnown RBP15.54■□□□□ 0.08
UPF3B-202ENST00000345865 PFKPQ01813 784 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 SULT2A1Q06520 285 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 CDC16Q13042 620 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 SERINC3Q13530 473 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 SLC14A2Q15849 920 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 TMEM154Q6P9G4 183 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 RNF19BQ6ZMZ0 732 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 PAXIP1Q6ZW49 1069 aaPredicted RBP15.54■□□□□ 0.08
UPF3B-202ENST00000345865 DHDDSQ86SQ9 333 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 RNF180Q86T96 592 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 DSELQ8IZU8 1212 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 OR6P1Q8NGX9 317 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 RCN3Q96D15 328 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 MAELQ96JY0 434 aaKnown RBP15.54■□□□□ 0.08
UPF3B-202ENST00000345865 ECSITQ9BQ95 431 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 CCDC28BQ9BUN5 200 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 CCSER2Q9H7U1 834 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 COPG1Q9Y678 874 aaKnown RBP15.54■□□□□ 0.08
UPF3B-202ENST00000345865 SLCO1B7G3V0H7 640 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 H3BNX3 289 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 RAMP2O60895 175 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 PAPSS2O95340 614 aaPredicted RBP15.53■□□□□ 0.08
UPF3B-202ENST00000345865 WISP3O95389 354 aaPredicted RBP15.53■□□□□ 0.08
UPF3B-202ENST00000345865 PBX3P40426 434 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 DPP6P42658 865 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 CLCN5P51795 746 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 TNK2Q07912 1038 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 ASPHQ12797 758 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 LRRC36Q1X8D7 754 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 FAM83EQ2M2I3 478 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 LPCAT4Q643R3 524 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 CAPRIN2Q6IMN6 1127 aaKnown RBP15.53■□□□□ 0.08
UPF3B-202ENST00000345865 PIWIL4Q7Z3Z4 852 aaKnown RBP15.53■□□□□ 0.08
UPF3B-202ENST00000345865 PIM3Q86V86 326 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 RP9Q8TA86 221 aaKnown RBP15.53■□□□□ 0.08
UPF3B-202ENST00000345865 CALML6Q8TD86 181 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 SPDL1Q96EA4 605 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 ZBTB26Q9HCK0 441 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 FIS1Q9Y3D6 152 aa15.53■□□□□ 0.08
UPF3B-202ENST00000345865 MTMR11A4FU01 709 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 SLC7A4O43246 635 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 LTA4HP09960 611 aaKnown RBP15.52■□□□□ 0.08
UPF3B-202ENST00000345865 SP100P23497 879 aaPredicted RBP15.52■□□□□ 0.08
UPF3B-202ENST00000345865 OR1E1P30953 314 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 CYLC2Q14093 348 aaPredicted RBP15.52■□□□□ 0.08
UPF3B-202ENST00000345865 MGAT5BQ3V5L5 792 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 KBTBD6Q86V97 674 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 STON2Q8WXE9 905 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 GATA6Q92908 595 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 PHF21BQ96EK2 531 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 TBATAQ96M53 351 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 GLT1D1Q96MS3 346 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 SEPT5Q99719 369 aaPredicted RBP15.52■□□□□ 0.08
UPF3B-202ENST00000345865 SEMA3CQ99985 751 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 MARCH5Q9NX47 278 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 GTSE1Q9NYZ3 720 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 VWA7Q9Y334 891 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 ARL5AQ9Y689 179 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 TET1Q8NFU7 2136 aa15.52■□□□□ 0.08
UPF3B-202ENST00000345865 NT5C1B-RDH14C9J2C7 533 aa15.52■□□□□ 0.07
UPF3B-202ENST00000345865 IPO13O94829 963 aaKnown RBP15.52■□□□□ 0.07
UPF3B-202ENST00000345865 MSX2P35548 267 aaPredicted RBP15.52■□□□□ 0.07
UPF3B-202ENST00000345865 KCNQ1P51787 676 aa15.52■□□□□ 0.07
UPF3B-202ENST00000345865 DSG1Q02413 1049 aa15.52■□□□□ 0.07
UPF3B-202ENST00000345865 IL10RBQ08334 325 aa15.52■□□□□ 0.07
UPF3B-202ENST00000345865 LBRQ14739 615 aaKnown RBP15.52■□□□□ 0.07
UPF3B-202ENST00000345865 GPNMBQ14956 572 aa15.52■□□□□ 0.07
UPF3B-202ENST00000345865 GPR158Q5T848 1215 aa15.52■□□□□ 0.07
UPF3B-202ENST00000345865 AGAP9Q5VTM2 703 aa15.52■□□□□ 0.07
UPF3B-202ENST00000345865 CFAP52Q8N1V2 620 aa15.52■□□□□ 0.07
UPF3B-202ENST00000345865 KYQ8NBH2 561 aa15.52■□□□□ 0.07
UPF3B-202ENST00000345865 MFSD1Q9H3U5 465 aa15.52■□□□□ 0.07
UPF3B-202ENST00000345865 TLR8Q9NR97 1041 aaKnown RBP15.52■□□□□ 0.07
UPF3B-202ENST00000345865 ABT1Q9ULW3 272 aaKnown RBP15.52■□□□□ 0.07
UPF3B-202ENST00000345865 CRYL1Q9Y2S2 319 aa15.52■□□□□ 0.07
UPF3B-202ENST00000345865 LAMA2P24043 3122 aaKnown RBP15.52■□□□□ 0.07
UPF3B-202ENST00000345865 CHD5Q8TDI0 1954 aa15.52■□□□□ 0.07
UPF3B-202ENST00000345865 A0A0D9SEW6 157 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 PIRTP0C851 137 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 THOP1P52888 689 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 C1QTNF8P60827 252 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 TIAL1Q01085 375 aaKnown RBP eCLIP15.51■□□□□ 0.07
UPF3B-202ENST00000345865 ZRSR2Q15696 482 aaKnown RBP15.51■□□□□ 0.07
UPF3B-202ENST00000345865 RTP2Q5QGT7 225 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 ZNF549Q6P9A3 640 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 TMEM173Q86WV6 379 aaPredicted RBP15.51■□□□□ 0.07
UPF3B-202ENST00000345865 OR52K2Q8NGK3 314 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 HMGCLL1Q8TB92 370 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 GIPC2Q8TF65 315 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 JADE3Q92613 823 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 NSMCE3Q96MG7 304 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 CDRT15Q96T59 188 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 DLGAP2Q9P1A6 1054 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 TCAF2A6NFQ2 919 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 STX16-NPEPL1H3BU86 382 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 MAP3K13O43283 966 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 RAG1P15918 1043 aa15.51■□□□□ 0.07
UPF3B-202ENST00000345865 FGFR3P22607 806 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms