RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ZDHHC2Q9UIJ5 367 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 FKBPLQ9UIM3 349 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 TRMT6Q9UJA5 497 aaKnown RBP13.39□□□□□ -0.27
CASC4-202ENST00000345795 WDR87Q6ZQQ6 2873 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 C1orf232A0A0U1RR37 186 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 NIPSNAP2O75323 286 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 ALDH1A1P00352 501 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 S100BP04271 92 aaPredicted RBP13.38□□□□□ -0.27
CASC4-202ENST00000345795 POU4F1Q01851 419 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 CYLC2Q14093 348 aaPredicted RBP13.38□□□□□ -0.27
CASC4-202ENST00000345795 DPYSQ14117 519 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 IMPG1Q17R60 797 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 RSPO2Q6UXX9 243 aaPredicted RBP13.38□□□□□ -0.27
CASC4-202ENST00000345795 MYOCQ99972 504 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 UBE2OQ9C0C9 1292 aaKnown RBP13.38□□□□□ -0.27
CASC4-202ENST00000345795 IGFLR1Q9H665 355 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 DNMT3LQ9UJW3 386 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 ARHGAP26Q9UNA1 814 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 VWA7Q9Y334 891 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 RNF103-CHMP3A0A140T963 221 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 MTMR11A4FU01 709 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 E7ESA3 106 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 GABRDO14764 452 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 MATN3O15232 486 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 OR1I1O60431 355 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 RPL14P50914 215 aaKnown RBP13.38□□□□□ -0.27
CASC4-202ENST00000345795 ENPEPQ07075 957 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 MBTPS1Q14703 1052 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 AP5B1Q2VPB7 878 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 MRPS31Q92665 395 aaKnown RBP13.38□□□□□ -0.27
CASC4-202ENST00000345795 TRIM62Q9BVG3 475 aa13.38□□□□□ -0.27
CASC4-202ENST00000345795 MRPL1Q9BYD6 325 aaKnown RBP13.38□□□□□ -0.27
CASC4-202ENST00000345795 HMX2A2RU54 273 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 PAX7P23759 505 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 IDH3AP50213 366 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 C4orf22Q6V702 233 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 AMIGO2Q86SJ2 522 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 SUGP1Q8IWZ8 645 aaKnown RBP13.37□□□□□ -0.27
CASC4-202ENST00000345795 MYEOVQ96EZ4 313 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 RHOJQ9H4E5 214 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 KCNK4Q9NYG8 393 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 AGO1Q9UL18 857 aaKnown RBP13.37□□□□□ -0.27
CASC4-202ENST00000345795 CPQQ9Y646 472 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 ZNF831Q5JPB2 1677 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 GREB1LQ9C091 1923 aaPredicted RBP13.37□□□□□ -0.27
CASC4-202ENST00000345795 CCDC162PA2VCL2 907 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 HAS3O00219 553 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 TCEA3O75764 348 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 CD1EP15812 388 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 NEK3P51956 506 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 KPNA2P52292 529 aaKnown RBP13.37□□□□□ -0.27
CASC4-202ENST00000345795 NIPAL4Q0D2K0 466 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 IKBKEQ14164 716 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 LSM12Q3MHD2 195 aaKnown RBP13.37□□□□□ -0.27
CASC4-202ENST00000345795 HECTD2Q5U5R9 776 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 FRMD7Q6ZUT3 714 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 CCNJLQ8IV13 435 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 TMEM174Q8WUU8 243 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 EME1Q96AY2 570 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 BTN2A3PQ96KV6 586 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 GPR21Q99679 349 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 PCDHAC1Q9H158 963 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 MTG2Q9H4K7 406 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 MID2Q9UJV3 735 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 ANGPTL2Q9UKU9 493 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 NPEPPSL1A6NEC2 478 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 ANGPT2O15123 496 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 UBDO15205 165 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 KLHL2O95198 593 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 CSF2RAP15509 400 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 GRK2P25098 689 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 GLUD2P49448 558 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 MAPK10P53779 464 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 PTK2BQ14289 1009 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 TSNQ15631 228 aaKnown RBP13.37□□□□□ -0.27
CASC4-202ENST00000345795 SIRPB2Q5JXA9 342 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 THEMIS2Q5TEJ8 643 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 MARK2Q7KZI7 788 aaKnown RBP13.37□□□□□ -0.27
CASC4-202ENST00000345795 TMPRSS6Q8IU80 811 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 SLC22A17Q8WUG5 538 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 NSUN5Q96P11 429 aaKnown RBP13.37□□□□□ -0.27
CASC4-202ENST00000345795 MYCBPQ99417 103 aaPredicted RBP13.37□□□□□ -0.27
CASC4-202ENST00000345795 MRPL46Q9H2W6 279 aaKnown RBP13.37□□□□□ -0.27
CASC4-202ENST00000345795 VCX3BQ9H321 246 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 CXorf56Q9H5V9 222 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 BRWD1Q9NSI6 2320 aa13.37□□□□□ -0.27
CASC4-202ENST00000345795 ARID1BQ8NFD5 2236 aaPredicted RBP13.37□□□□□ -0.27
CASC4-202ENST00000345795 NUP214P35658 2090 aaPredicted RBP13.37□□□□□ -0.27
CASC4-202ENST00000345795 CD3EAPO15446 510 aaKnown RBP13.36□□□□□ -0.27
CASC4-202ENST00000345795 DNAJA2O60884 412 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 T-ENOLP0DO92 83 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 GM2AP17900 193 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 PRKCHP24723 683 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 MZF1P28698 734 aaPredicted RBP13.36□□□□□ -0.27
CASC4-202ENST00000345795 MC4RP32245 332 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 WASP42768 502 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 USP41Q3LFD5 358 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 LACTB2Q53H82 288 aaPredicted RBP13.36□□□□□ -0.27
CASC4-202ENST00000345795 UTP4Q969X6 686 aaKnown RBP13.36□□□□□ -0.27
CASC4-202ENST00000345795 SLC7A6OSQ96CW6 309 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms