RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 DNAJB1P25685 340 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 OXCT1P55809 520 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 CYP4F8P98187 520 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 ZNF235Q14590 738 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 RFTN1Q14699 578 aaPredicted RBP12.93□□□□□ -0.34
CLK3-201ENST00000345005 STXBP5Q5T5C0 1151 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 DENND5AQ6IQ26 1287 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 CES3Q6UWW8 571 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 ZNF783Q6ZMS7 281 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 Q6ZNB5 142 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 RASSF3Q86WH2 238 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 SCUBE1Q8IWY4 988 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 UNC5BQ8IZJ1 945 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 HJURPQ8NCD3 748 aaPredicted RBP12.93□□□□□ -0.34
CLK3-201ENST00000345005 OR7D4Q8NG98 312 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 ADAMTS19Q8TE59 1207 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 PPP2R3CQ969Q6 453 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 CORO1BQ9BR76 489 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 SPON2Q9BUD6 331 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 POLR1EQ9GZS1 481 aaKnown RBP12.93□□□□□ -0.34
CLK3-201ENST00000345005 PDFQ9HBH1 243 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 CHRAC1Q9NRG0 131 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 NDUFA13Q9P0J0 144 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 ZCWPW2A0A1B0GU75 182 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 B2RBV5 119 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 CCL16O15467 120 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 GREM1O60565 184 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 UGT1A9O60656 530 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 MYL2P10916 166 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 MYL4P12829 197 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 HOXD9P28356 352 aaPredicted RBP12.92□□□□□ -0.34
CLK3-201ENST00000345005 CD86P42081 329 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 SGSHP51688 502 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 SESN3P58005 492 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 MAXP61244 160 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 PKN3Q6P5Z2 889 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 RINLQ6ZS11 566 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 SH2D5Q6ZV89 423 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 HTR3DQ70Z44 454 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 CRLF3Q8IUI8 442 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 FAM217AQ8IXS0 508 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 PPHLN1Q8NEY8 458 aaKnown RBP12.92□□□□□ -0.34
CLK3-201ENST00000345005 TADA1Q96BN2 335 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 TMA16Q96EY4 203 aaKnown RBP12.92□□□□□ -0.34
CLK3-201ENST00000345005 IFT43Q96FT9 208 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 SERAC1Q96JX3 654 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 CPNE1Q99829 537 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 CENPKQ9BS16 269 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 C17orf80Q9BSJ5 609 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 ACE2Q9BYF1 805 aaPredicted RBP12.92□□□□□ -0.34
CLK3-201ENST00000345005 UGT1A7Q9HAW7 530 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 UGT1A10Q9HAW8 530 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 UGT1A8Q9HAW9 530 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 MRM3Q9HC36 420 aaKnown RBP12.92□□□□□ -0.34
CLK3-201ENST00000345005 ATP13A1Q9HD20 1204 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 TXNDC16Q9P2K2 825 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 SLC17A7Q9P2U7 560 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 UBA2Q9UBT2 640 aaPredicted RBP12.92□□□□□ -0.34
CLK3-201ENST00000345005 SEPT3Q9UH03 358 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 MYO7AQ13402 2215 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 CAPN14A8MX76 684 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 TBL1XO60907 577 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 KRT36O76013 467 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 MMP2P08253 660 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 ERVK-10P10266 1014 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 PYGBP11216 843 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 IMPDH2P12268 514 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 PTPN2P17706 415 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 DDX6P26196 483 aaKnown RBP eCLIP12.92□□□□□ -0.34
CLK3-201ENST00000345005 CRABP2P29373 138 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 DSC2Q02487 901 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 OVGP1Q12889 678 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 THOC5Q13769 683 aaKnown RBP12.92□□□□□ -0.34
CLK3-201ENST00000345005 PCSK7Q16549 785 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 THEMIS2Q5TEJ8 643 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 RNF219Q5W0B1 726 aaPredicted RBP12.92□□□□□ -0.34
CLK3-201ENST00000345005 PACS1Q6VY07 963 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 TIFABQ6ZNK6 161 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 MYLK4Q86YV6 388 aaPredicted RBP12.92□□□□□ -0.34
CLK3-201ENST00000345005 RBM12BQ8IXT5 1001 aaKnown RBP12.92□□□□□ -0.34
CLK3-201ENST00000345005 PGBD5Q8N414 524 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 OR52K2Q8NGK3 314 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 ARRDC2Q8TBH0 407 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 SLC22A17Q8WUG5 538 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 PTPRN2Q92932 1015 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 MUC3BQ9H195 1237 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 NDE1Q9NXR1 346 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 PLLPQ9Y342 182 aa12.92□□□□□ -0.34
CLK3-201ENST00000345005 A0A1W2PRU2 124 aa12.91□□□□□ -0.34
CLK3-201ENST00000345005 H0Y626 953 aa12.91□□□□□ -0.34
CLK3-201ENST00000345005 GOLGA8RI6L899 631 aa12.91□□□□□ -0.34
CLK3-201ENST00000345005 GFRA2O00451 464 aa12.91□□□□□ -0.34
CLK3-201ENST00000345005 KLHL2O95198 593 aa12.91□□□□□ -0.34
CLK3-201ENST00000345005 SERPINA6P08185 405 aa12.91□□□□□ -0.34
CLK3-201ENST00000345005 CES1P23141 567 aa12.91□□□□□ -0.34
CLK3-201ENST00000345005 GP5P40197 560 aa12.91□□□□□ -0.34
CLK3-201ENST00000345005 EPHA5P54756 1037 aa12.91□□□□□ -0.34
CLK3-201ENST00000345005 ACTR3P61158 418 aa12.91□□□□□ -0.34
CLK3-201ENST00000345005 ZXDBP98169 803 aa12.91□□□□□ -0.34
CLK3-201ENST00000345005 SLC14A2Q15849 920 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms