RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 MBNL1Q9NR56 388 aaKnown RBP14.55□□□□□ -0.08
HMGN3-202ENST00000344726 RCOR3Q9P2K3 495 aaPredicted RBP14.55□□□□□ -0.08
HMGN3-202ENST00000344726 SEPT3Q9UH03 358 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 COQ6Q9Y2Z9 468 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 PCDHGA1Q9Y5H4 931 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 APC2O95996 2303 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 ACACAQ13085 2346 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 RP1P56715 2156 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 LY6G6EA0A0G2JKS1 128 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 SPTY2D1-AS1A0A0U1RR47 76 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 TRABD2BA6NFA1 517 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 TMEM110-MUSTN1A8MSY1 372 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 AKR1B15C9JRZ8 316 aaPredicted RBP14.54□□□□□ -0.08
HMGN3-202ENST00000344726 FPGTO14772 594 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 FFAR2O15552 330 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 NEBLO76041 1014 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 TM7SF2O76062 418 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 TPM1P09493 284 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 CKMT2P17540 419 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 CR2P20023 1033 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 MMP12P39900 470 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 SCNN1BP51168 640 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 PFN3P60673 137 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 TSR1Q2NL82 804 aaKnown RBP14.54□□□□□ -0.08
HMGN3-202ENST00000344726 NCBP2-AS2Q69YL0 99 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 BRAT1Q6PJG6 821 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 NYAP1Q6ZVC0 841 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 GALNT15Q8N3T1 639 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 TC2NQ8N9U0 490 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 TP53I13Q8NBR0 393 aaPredicted RBP14.54□□□□□ -0.08
HMGN3-202ENST00000344726 OR4C6Q8NH72 309 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 FAM174AQ8TBP5 190 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 CCDC42Q96M95 316 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 CCDC86Q9H6F5 360 aaKnown RBP14.54□□□□□ -0.08
HMGN3-202ENST00000344726 ATP13A3Q9H7F0 1226 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 U3KQA8 63 aa14.54□□□□□ -0.08
HMGN3-202ENST00000344726 MAP3K6O95382 1288 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 C6P13671 934 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 XPAP23025 273 aaPredicted RBP14.53□□□□□ -0.08
HMGN3-202ENST00000344726 SERPINA4P29622 427 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 MAN1A1P33908 653 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 SERPINB6P35237 376 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 RABIFP47224 123 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 SUOXP51687 545 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 MAXP61244 160 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 BCL2L1Q07817 233 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 ELP6Q0PNE2 266 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 RALGDSQ12967 914 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 EIF2B5Q13144 721 aaKnown RBP14.53□□□□□ -0.08
HMGN3-202ENST00000344726 ZNF211Q13398 564 aaPredicted RBP14.53□□□□□ -0.08
HMGN3-202ENST00000344726 PDE1CQ14123 709 aaPredicted RBP14.53□□□□□ -0.08
HMGN3-202ENST00000344726 ZNF235Q14590 738 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 MESDQ14696 234 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 PAFAH1B3Q15102 231 aaKnown RBP14.53□□□□□ -0.08
HMGN3-202ENST00000344726 ANKRD20A8PQ5CZ79 823 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 DCP2Q8IU60 420 aaKnown RBP14.53□□□□□ -0.08
HMGN3-202ENST00000344726 CNGA4Q8IV77 575 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 ATPAF2Q8N5M1 289 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 PQLC3Q8N755 202 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 KCTD6Q8NC69 237 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 FAF2Q96CS3 445 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 MGME1Q9BQP7 344 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 TRIM5Q9C035 493 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 TCEAL2Q9H3H9 227 aaPredicted RBP14.53□□□□□ -0.08
HMGN3-202ENST00000344726 DNAJC28Q9NX36 388 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 ATP8A1Q9Y2Q0 1164 aa14.53□□□□□ -0.08
HMGN3-202ENST00000344726 COL27A1Q8IZC6 1860 aaPredicted RBP14.52□□□□□ -0.08
HMGN3-202ENST00000344726 MTA2O94776 668 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 CSF2P04141 144 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 NME1P15531 152 aaKnown RBP14.52□□□□□ -0.09
HMGN3-202ENST00000344726 ACP1P24666 158 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 LIG3P49916 1009 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 RENBPP51606 427 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 AP1S1P61966 158 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 INSM1Q01101 510 aaPredicted RBP14.52□□□□□ -0.09
HMGN3-202ENST00000344726 CYP4F3Q08477 520 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 PDK2Q15119 407 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 IRF4Q15306 451 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 WSCD2Q2TBF2 565 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 CFAP58Q5T655 872 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 HES3Q5TGS1 186 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 PARGQ86W56 976 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 TMPRSS12Q86WS5 348 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 RBFAQ8N0V3 343 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 ZNF548Q8NEK5 533 aaPredicted RBP14.52□□□□□ -0.09
HMGN3-202ENST00000344726 LRRN4Q8WUT4 740 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 RAPGEF5Q92565 580 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 IFT43Q96FT9 208 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 NUDCD1Q96RS6 583 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 ZNF670Q9BS34 389 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 RBSNQ9H1K0 784 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 NOD2Q9HC29 1040 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 RAXQ9Y2V3 346 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 PCDHGC4Q9Y5F7 938 aa14.52□□□□□ -0.09
HMGN3-202ENST00000344726 ARHGEF17Q96PE2 2063 aaPredicted RBP14.52□□□□□ -0.09
HMGN3-202ENST00000344726 K7ESM1 405 aa14.51□□□□□ -0.09
HMGN3-202ENST00000344726 HTRA2O43464 458 aaPredicted RBP14.51□□□□□ -0.09
HMGN3-202ENST00000344726 KRT7P08729 469 aa14.51□□□□□ -0.09
HMGN3-202ENST00000344726 C1SP09871 688 aa14.51□□□□□ -0.09
HMGN3-202ENST00000344726 GM2AP17900 193 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms