RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 HOXC13P31276 330 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 EPHX2P34913 555 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 AFF1P51825 1210 aaKnown RBP23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 AGAP9Q5VTM2 703 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 RANBP10Q6VN20 620 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 KIAA0408Q6ZU52 694 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 OSBPL11Q9BXB4 747 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 NDFIP2Q9NV92 336 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 TMEM181Q9P2C4 612 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 MRPL42Q9Y6G3 142 aaKnown RBP23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 LTA4HP09960 611 aaKnown RBP23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 CYP2C18P33260 490 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 EIF4EBP2Q13542 120 aaPredicted RBP23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 FAM45BPQ6NSW5 357 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 CYP2R1Q6VVX0 501 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 CYHR1Q6ZMK1 362 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 EGFL6Q8IUX8 553 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 TSPAN14Q8NG11 270 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 FAM45AQ8TCE6 357 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 SLC29A1Q99808 456 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 PRKD2Q9BZL6 878 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 GSTO2Q9H4Y5 243 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 RBM22Q9NW64 420 aaKnown RBP eCLIP23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 IPO11Q9UI26 975 aaKnown RBP23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 SNX13Q9Y5W8 968 aa23.26■■□□□ 1.31
NKX2-3-201ENST00000344586 NYNRINQ9P2P1 1898 aaKnown RBP23.25■■□□□ 1.31
NKX2-3-201ENST00000344586 H3BSA7 217 aa23.25■■□□□ 1.31
NKX2-3-201ENST00000344586 UBFD1O14562 309 aaKnown RBP23.25■■□□□ 1.31
NKX2-3-201ENST00000344586 CDH2P19022 906 aaPredicted RBP23.25■■□□□ 1.31
NKX2-3-201ENST00000344586 MANEALQ5VSG8 457 aa23.25■■□□□ 1.31
NKX2-3-201ENST00000344586 OR9I1Q8NGQ6 314 aa23.25■■□□□ 1.31
NKX2-3-201ENST00000344586 NPLOC4Q8TAT6 608 aa23.25■■□□□ 1.31
NKX2-3-201ENST00000344586 PPP1R2P1Q96PQ5 205 aa23.25■■□□□ 1.31
NKX2-3-201ENST00000344586 RTP3Q9BQQ7 232 aa23.25■■□□□ 1.31
NKX2-3-201ENST00000344586 SLC25A23Q9BV35 468 aa23.25■■□□□ 1.31
NKX2-3-201ENST00000344586 SRP72O76094 671 aaKnown RBP23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 CCDC166P0CW27 439 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 ZNF23P17027 643 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 RIN3Q8TB24 985 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 PHF21BQ96EK2 531 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 ZNF512Q96ME7 567 aaPredicted RBP23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 HAUS8Q9BT25 410 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 SLC38A7Q9NVC3 462 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 FGF10O15520 208 aaPredicted RBP23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 PAGE1O75459 146 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 YWHAQP27348 245 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 PSEN2P49810 448 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 CLCN5P51795 746 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 USP46P62068 366 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 GALNT1Q10472 559 aaPredicted RBP23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 SLC14A2Q15849 920 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 SAMD4BQ5PRF9 694 aaKnown RBP23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 KLC3Q6P597 504 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 LAYNQ6UX15 382 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 HACD2Q6Y1H2 254 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 MYO1HQ8N1T3 1032 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 ANKRD49Q8WVL7 239 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 RANBP9Q96S59 729 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 CIB1Q99828 191 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 CROTQ9UKG9 612 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 TANC1Q9C0D5 1861 aa23.24■■□□□ 1.31
NKX2-3-201ENST00000344586 IRAK2O43187 625 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 NRP2O60462 931 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 H6PDO95479 791 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 LEPRP48357 1165 aaKnown RBP23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 HPCAP84074 193 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 PCSK7Q16549 785 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 PRAMEF19Q5SWL8 479 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 CLEC6AQ6EIG7 209 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 NUP93Q8N1F7 819 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 PNPLA1Q8N8W4 532 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 UBXN10Q96LJ8 280 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 GAD1Q99259 594 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 CCT7Q99832 543 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 SLC39A3Q9BRY0 314 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 TMEM79Q9BSE2 394 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 GMPR2Q9P2T1 348 aaKnown RBP23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 TRAF6Q9Y4K3 522 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 HNRNPRO43390 633 aaKnown RBP23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 GPC4O75487 556 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 RBP1P09455 135 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 NELFEP18615 380 aaKnown RBP23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 BDNFP23560 247 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 ALDH3B2P48448 385 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 ACAP2Q15057 778 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 AFMIDQ63HM1 303 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 KDELC1Q6UW63 502 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 LZTR1Q8N653 840 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 PBXIP1Q96AQ6 731 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 CATSPERBQ9H7T0 1116 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 NOL11Q9H8H0 719 aaKnown RBP23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 MIOSQ9NXC5 875 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 THEGQ9P2T0 379 aa23.23■■□□□ 1.31
NKX2-3-201ENST00000344586 H3BNH8 94 aa23.22■■□□□ 1.31
NKX2-3-201ENST00000344586 HAS3O00219 553 aa23.22■■□□□ 1.31
NKX2-3-201ENST00000344586 MT-CO1P00395 513 aa23.22■■□□□ 1.31
NKX2-3-201ENST00000344586 CDK4P11802 303 aa23.22■■□□□ 1.31
NKX2-3-201ENST00000344586 ATP4BP51164 291 aa23.22■■□□□ 1.31
NKX2-3-201ENST00000344586 SLC7A2P52569 658 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms