RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 IFI16Q16666 785 aaKnown RBP18.19■□□□□ 0.5
USF2-202ENST00000343550 MARC1Q5VT66 337 aa18.19■□□□□ 0.5
USF2-202ENST00000343550 TTC7BQ86TV6 843 aa18.19■□□□□ 0.5
USF2-202ENST00000343550 TMPRSS12Q86WS5 348 aa18.19■□□□□ 0.5
USF2-202ENST00000343550 PGBD5Q8N414 524 aa18.19■□□□□ 0.5
USF2-202ENST00000343550 OXR1Q8N573 874 aa18.19■□□□□ 0.5
USF2-202ENST00000343550 TEX26Q8N6G2 289 aa18.19■□□□□ 0.5
USF2-202ENST00000343550 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.19■□□□□ 0.5
USF2-202ENST00000343550 HCAR2Q8TDS4 363 aa18.19■□□□□ 0.5
USF2-202ENST00000343550 KRT35Q92764 455 aa18.19■□□□□ 0.5
USF2-202ENST00000343550 SUV39H2Q9H5I1 410 aa18.19■□□□□ 0.5
USF2-202ENST00000343550 DKK3Q9UBP4 350 aa18.19■□□□□ 0.5
USF2-202ENST00000343550 PCDHA3Q9Y5H8 950 aa18.19■□□□□ 0.5
USF2-202ENST00000343550 ANKRD11Q6UB99 2663 aaPredicted RBP18.19■□□□□ 0.5
USF2-202ENST00000343550 MACROD2A1Z1Q3 448 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 GRID2IPA4D2P6 1211 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 PRAMEF26H0Y7S4 382 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 APOL1O14791 398 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 MATN3O15232 486 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 MAGEC1O60732 1142 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 RNGTTO60942 597 aaKnown RBP18.18■□□□□ 0.5
USF2-202ENST00000343550 PIGNO95427 931 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 C1SP09871 688 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 KRT10P13645 584 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 HOXB3P14651 431 aaPredicted RBP18.18■□□□□ 0.5
USF2-202ENST00000343550 ZFXP17010 805 aaPredicted RBP18.18■□□□□ 0.5
USF2-202ENST00000343550 MX2P20592 715 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 SCNN1BP51168 640 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 DNAJC3Q13217 504 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 SETMARQ53H47 684 aaPredicted RBP18.18■□□□□ 0.5
USF2-202ENST00000343550 SPOCD1Q6ZMY3 1216 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 RFX6Q8HWS3 928 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 CAMK1DQ8IU85 385 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 PDCD7Q8N8D1 485 aaKnown RBP18.18■□□□□ 0.5
USF2-202ENST00000343550 EXD1Q8NHP7 514 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 LRRN4Q8WUT4 740 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 NSMCE1Q8WV22 266 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 FATE1Q969F0 183 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 NSMCE3Q96MG7 304 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 ZNF641Q96N77 438 aaPredicted RBP18.18■□□□□ 0.5
USF2-202ENST00000343550 TUBGCP5Q96RT8 1024 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 HEY1Q9Y5J3 304 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 FADS3Q9Y5Q0 445 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 CACNA1GO43497 2377 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 TTC24A2A3L6 582 aaPredicted RBP18.18■□□□□ 0.5
USF2-202ENST00000343550 AP1G1O43747 822 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 PCDH8O95206 1070 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 CDK4P11802 303 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 TIMP2P16035 220 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 CR2P20023 1033 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 CTNNA1P35221 906 aaKnown RBP18.18■□□□□ 0.5
USF2-202ENST00000343550 HSPA9P38646 679 aaKnown RBP18.18■□□□□ 0.5
USF2-202ENST00000343550 MMP13P45452 471 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 PEX5P50542 639 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 ZNF235Q14590 738 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 LLGL1Q15334 1064 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 TIGD7Q6NT04 549 aaPredicted RBP18.18■□□□□ 0.5
USF2-202ENST00000343550 BBS5Q8N3I7 341 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 RAB7BQ96AH8 199 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 HDAC11Q96DB2 347 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 FEM1CQ96JP0 617 aa18.18■□□□□ 0.5
USF2-202ENST00000343550 ZFR2Q9UPR6 939 aaKnown RBP18.18■□□□□ 0.5
USF2-202ENST00000343550 SHROOM3Q8TF72 1996 aa18.17■□□□□ 0.5
USF2-202ENST00000343550 COL5A1P20908 1838 aaPredicted RBP18.17■□□□□ 0.5
USF2-202ENST00000343550 A0A1W2PQU0 124 aa18.17■□□□□ 0.5
USF2-202ENST00000343550 RFPL3O75679 317 aa18.17■□□□□ 0.5
USF2-202ENST00000343550 ABL2P42684 1182 aa18.17■□□□□ 0.5
USF2-202ENST00000343550 CCZ1BP86790 482 aa18.17■□□□□ 0.5
USF2-202ENST00000343550 CCZ1P86791 482 aaPredicted RBP18.17■□□□□ 0.5
USF2-202ENST00000343550 TFDP3Q5H9I0 405 aa18.17■□□□□ 0.5
USF2-202ENST00000343550 NPNTQ6UXI9 565 aa18.17■□□□□ 0.5
USF2-202ENST00000343550 KANSL1Q7Z3B3 1105 aa18.17■□□□□ 0.5
USF2-202ENST00000343550 NT5DC3Q86UY8 548 aa18.17■□□□□ 0.5
USF2-202ENST00000343550 RNF10Q8N5U6 811 aaKnown RBP18.17■□□□□ 0.5
USF2-202ENST00000343550 CCNYQ8ND76 341 aa18.17■□□□□ 0.5
USF2-202ENST00000343550 MAML1Q92585 1016 aa18.17■□□□□ 0.5
USF2-202ENST00000343550 LGMNQ99538 433 aa18.17■□□□□ 0.5
USF2-202ENST00000343550 MGME1Q9BQP7 344 aa18.17■□□□□ 0.5
USF2-202ENST00000343550 ATP13A3Q9H7F0 1226 aa18.17■□□□□ 0.5
USF2-202ENST00000343550 DOCK9Q9BZ29 2069 aa18.17■□□□□ 0.5
USF2-202ENST00000343550 GOLGA4Q13439 2230 aaKnown RBP18.16■□□□□ 0.5
USF2-202ENST00000343550 CCDC66A2RUB6 948 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 AREL1O15033 823 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 CST8O60676 142 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 CCNB1P14635 433 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 JUPP14923 745 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 CTNNA2P26232 953 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 ACADVLP49748 655 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 AP1S1P61966 158 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 DYNLT1P63172 113 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 ADCY2Q08462 1091 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 TFDP2Q14188 446 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 COL28A1Q2UY09 1125 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 ZNF284Q2VY69 593 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 KAZNQ674X7 775 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 HORMAD1Q86X24 394 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 HNRNPLLQ8WVV9 542 aaKnown RBP18.16■□□□□ 0.5
USF2-202ENST00000343550 KLHDC7BQ96G42 594 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 RBM41Q96IZ5 413 aaKnown RBP18.16■□□□□ 0.5
USF2-202ENST00000343550 NUDCD1Q96RS6 583 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms