RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 NKX1-2Q9UD57 310 aaPredicted RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 STK39Q9UEW8 545 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 LNPEPQ9UIQ6 1025 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 PAIP2BQ9ULR5 123 aaKnown RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 ULK1O75385 1050 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 LPOP22079 712 aaPredicted RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 MAPK10P53779 464 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 SLC5A3P53794 718 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 INCA1Q0VD86 236 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 HSPA14Q0VDF9 509 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 TAF10Q12962 218 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 HECTD2Q5U5R9 776 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 NCBP2-AS2Q69YL0 99 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 OTUB1Q96FW1 271 aaPredicted RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 ROGDIQ9GZN7 287 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 BPIFA1Q9NP55 256 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 BAZ2AQ9UIF9 1905 aaKnown RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 NEMP2A6NFY4 417 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 FZD9O00144 591 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 FFAR3O14843 346 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 GPR42O15529 346 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 HCRTO43612 131 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 POU1F1P28069 291 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 CHRNA4P43681 627 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 TTPAP49638 278 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 ZNF132P52740 706 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 HNRNPDQ14103 355 aaKnown RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 GALNT3Q14435 633 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 CRY1Q16526 586 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 SLC5A9Q2M3M2 681 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 GPR158Q5T848 1215 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 SLC9A4Q6AI14 798 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 B4GALNT2Q8NHY0 566 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 LPGAT1Q92604 370 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 TCF12Q99081 682 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 FAM126AQ9BYI3 521 aaPredicted RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 TRIM45Q9H8W5 580 aaPredicted RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 FBXW11Q9UKB1 542 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 TCAF1Q9Y4C2 921 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 PCDHB9Q9Y5E1 797 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 MLYCDO95822 493 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 BCL10O95999 233 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 CHRNGP07510 517 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 LINC00032P0C843 101 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 PRKCHP24723 683 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 ACSM2AQ08AH3 577 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 SPRED3Q2MJR0 410 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 ZIK1Q3SY52 487 aaPredicted RBP7.22□□□□□ -1.25
VCAN-202ENST00000342785 TMEM198Q66K66 360 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 ACSM2BQ68CK6 577 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 ZYG11AQ6WRX3 759 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 GPRIN3Q6ZVF9 776 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 PGAM4Q8N0Y7 254 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 WDR60Q8WVS4 1066 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 NTAN1Q96AB6 310 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 SLC25A51Q9H1U9 297 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 A0A1W2PQH9 124 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 KCNU1A8MYU2 1149 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 MATN3O15232 486 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 HS6ST1O60243 411 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 RHOQP17081 205 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 WEE1P30291 646 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 ADSLP30566 484 aaPredicted RBP7.22□□□□□ -1.25
VCAN-202ENST00000342785 DSC2Q02487 901 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 CDC16Q13042 620 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 TTC23Q5W5X9 447 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 CLEC20AQ6ZU45 233 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 RAB42Q8N4Z0 105 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 CNTD1Q8N815 330 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 DGCR14Q96DF8 476 aaKnown RBP7.22□□□□□ -1.25
VCAN-202ENST00000342785 PANX3Q96QZ0 392 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 CIB1Q99828 191 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 ACBD6Q9BR61 282 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 MRPL9Q9BYD2 267 aaKnown RBP7.22□□□□□ -1.25
VCAN-202ENST00000342785 SH3BP4Q9P0V3 963 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 COL14A1Q05707 1796 aaKnown RBP7.22□□□□□ -1.25
VCAN-202ENST00000342785 SH3BGRLO75368 114 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 DGKAP23743 735 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 PSMB9P28065 219 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 TMED10P49755 219 aaKnown RBP7.22□□□□□ -1.25
VCAN-202ENST00000342785 MAPKAPK3Q16644 382 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 FAM187BQ17R55 369 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 AFTPHQ6ULP2 937 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 FAM47BQ8NA70 645 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 SPPL2AQ8TCT8 520 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 PTCD2Q8WV60 388 aaKnown RBP7.22□□□□□ -1.25
VCAN-202ENST00000342785 SELENOMQ8WWX9 145 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 IRGQQ8WZA9 623 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 BTN2A3PQ96KV6 586 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 POLR1BQ9H9Y6 1135 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 AGO1Q9UL18 857 aaKnown RBP7.22□□□□□ -1.25
VCAN-202ENST00000342785 C1orf232A0A0U1RR37 186 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.22□□□□□ -1.25
VCAN-202ENST00000342785 RGS14O43566 566 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 WARSP23381 471 aaKnown RBP7.22□□□□□ -1.25
VCAN-202ENST00000342785 GLUD2P49448 558 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 YBEYP58557 167 aaPredicted RBP7.22□□□□□ -1.25
VCAN-202ENST00000342785 SMAD3P84022 425 aaKnown RBP7.22□□□□□ -1.25
VCAN-202ENST00000342785 BNIP2Q12982 314 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 RBM44Q6ZP01 1051 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms