RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 MRM3Q9HC36 420 aaKnown RBP18.63■□□□□ 0.57
SMPD1-201ENST00000342245 SNTG2Q9NY99 539 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 LTBP4Q8N2S1 1624 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 FAM149AA5PLN7 773 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 SNAP29O95721 258 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 ELK4P28324 431 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 NUDT1P36639 197 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 ATP4BP51164 291 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 MAPK11Q15759 364 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 ZBTB41Q5SVQ8 909 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 ZNF544Q6NX49 715 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 ERAP2Q6P179 960 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 RALGPS2Q86X27 583 aaPredicted RBP18.63■□□□□ 0.57
SMPD1-201ENST00000342245 PAPD5Q8NDF8 572 aaKnown RBP18.63■□□□□ 0.57
SMPD1-201ENST00000342245 ZNF560Q96MR9 790 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 RDH12Q96NR8 316 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 ABCD2Q9UBJ2 740 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 KCNN3Q9UGI6 736 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 MAGEB16A2A368 324 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 B8ZZF3 427 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 CCRL2O00421 344 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 UBDO15205 165 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 PRPSAP2O60256 369 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 GPC4O75487 556 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 SEC24AO95486 1093 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 LDLRP01130 860 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 AXLP30530 894 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 RPS6P62753 249 aaKnown RBP18.62■□□□□ 0.57
SMPD1-201ENST00000342245 PSMD5Q16401 504 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 SHROOM1Q2M3G4 852 aaPredicted RBP18.62■□□□□ 0.57
SMPD1-201ENST00000342245 ZCCHC8Q6NZY4 707 aaKnown RBP18.62■□□□□ 0.57
SMPD1-201ENST00000342245 R3HCC1LQ7Z5L2 792 aaKnown RBP18.62■□□□□ 0.57
SMPD1-201ENST00000342245 LGI2Q8N0V4 545 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 PQLC3Q8N755 202 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 KDM1BQ8NB78 822 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 OR13J1Q8NGT2 312 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 HTRA1Q92743 480 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 SLC10A4Q96EP9 437 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 MUS81Q96NY9 551 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 POLE4Q9NR33 117 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 WBP11Q9Y2W2 641 aaKnown RBP18.62■□□□□ 0.57
SMPD1-201ENST00000342245 CAB39Q9Y376 341 aaPredicted RBP18.62■□□□□ 0.57
SMPD1-201ENST00000342245 TCP10L2B9ZVM9 353 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 NDUFS2O75306 463 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 RRM2P31350 389 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 LIG4P49917 911 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 ZNF143P52747 638 aaPredicted RBP18.62■□□□□ 0.57
SMPD1-201ENST00000342245 MYL6P60660 151 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 PPP2R2BQ00005 443 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 TSPY1Q01534 308 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 EPS8Q12929 822 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 BOLA3Q53S33 107 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 ELMOD2Q8IZ81 293 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 C8orf59Q8N0T1 100 aaPredicted RBP18.62■□□□□ 0.57
SMPD1-201ENST00000342245 BDH2Q9BUT1 245 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 ADNPQ9H2P0 1102 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 DDX4Q9NQI0 724 aaKnown RBP18.62■□□□□ 0.57
SMPD1-201ENST00000342245 MOSPD1Q9UJG1 213 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 AP4E1Q9UPM8 1137 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 GPSM3Q9Y4H4 160 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 MAU2Q9Y6X3 613 aa18.62■□□□□ 0.57
SMPD1-201ENST00000342245 ADGRA2Q96PE1 1338 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 FADS2P1A8MWK0 482 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 C2P06681 752 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 KRT19P08727 400 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 MSL3P1P0C860 447 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 NAGLUP54802 743 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 CTAG1AP78358 180 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 MRPS15P82914 257 aaKnown RBP18.61■□□□□ 0.57
SMPD1-201ENST00000342245 NPTX1Q15818 432 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 AGAP6Q5VW22 663 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 TTC23Q5W5X9 447 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 CATSPER4Q7RTX7 472 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 CDR2LQ86X02 465 aaPredicted RBP18.61■□□□□ 0.57
SMPD1-201ENST00000342245 XYLT1Q86Y38 959 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 SPPL2CQ8IUH8 684 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 POC5Q8NA72 575 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 AGAP4Q96P64 663 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 DEPDC7Q96QD5 511 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 CNPY3Q9BT09 278 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 PAK1IP1Q9NWT1 392 aaPredicted RBP18.61■□□□□ 0.57
SMPD1-201ENST00000342245 SYBUQ9NX95 663 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 MRPL11Q9Y3B7 192 aaKnown RBP18.61■□□□□ 0.57
SMPD1-201ENST00000342245 STYXL1Q9Y6J8 313 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 ZNF99A8MXY4 864 aaPredicted RBP18.61■□□□□ 0.57
SMPD1-201ENST00000342245 TOR1BO14657 336 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 KCNK2O95069 426 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 NDUFB10O96000 172 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 HMGCRP04035 888 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 GFAPP14136 432 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 DUSP7Q16829 419 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 HSDL1Q3SXM5 330 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 FSTL4Q6MZW2 842 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 ZNF598Q86UK7 904 aaKnown RBP18.61■□□□□ 0.57
SMPD1-201ENST00000342245 CCDC28AQ8IWP9 274 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 NATD1Q8N6N6 113 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 EMC1Q8N766 993 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 PSMA8Q8TAA3 256 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 FAM84AQ96KN4 292 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 CHID1Q9BWS9 393 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms