RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 FPGTO14772 594 aa19.33■□□□□ 0.68
SYNE4-202ENST00000340477 GJB3O75712 270 aa19.33■□□□□ 0.68
SYNE4-202ENST00000340477 ARRB1P49407 418 aaPredicted RBP19.33■□□□□ 0.68
SYNE4-202ENST00000340477 IFI35P80217 286 aaPredicted RBP19.33■□□□□ 0.68
SYNE4-202ENST00000340477 BNC1Q01954 994 aa19.33■□□□□ 0.68
SYNE4-202ENST00000340477 INAVAQ3KP66 663 aa19.33■□□□□ 0.68
SYNE4-202ENST00000340477 TMEM52BQ4KMG9 183 aa19.33■□□□□ 0.68
SYNE4-202ENST00000340477 ARMC12Q5T9G4 340 aa19.33■□□□□ 0.68
SYNE4-202ENST00000340477 NPNTQ6UXI9 565 aa19.33■□□□□ 0.68
SYNE4-202ENST00000340477 ERMP1Q7Z2K6 904 aa19.33■□□□□ 0.68
SYNE4-202ENST00000340477 PTAR1Q7Z6K3 402 aaPredicted RBP19.33■□□□□ 0.68
SYNE4-202ENST00000340477 TMEM145Q8NBT3 493 aa19.33■□□□□ 0.68
SYNE4-202ENST00000340477 TFB1MQ8WVM0 346 aaKnown RBP19.33■□□□□ 0.68
SYNE4-202ENST00000340477 OLFM3Q96PB7 478 aa19.33■□□□□ 0.68
SYNE4-202ENST00000340477 FERMT1Q9BQL6 677 aa19.33■□□□□ 0.68
SYNE4-202ENST00000340477 C1QTNF2Q9BXJ5 285 aa19.33■□□□□ 0.68
SYNE4-202ENST00000340477 TM7SF3Q9NS93 570 aa19.33■□□□□ 0.68
SYNE4-202ENST00000340477 TRIM10Q9UDY6 481 aa19.33■□□□□ 0.68
SYNE4-202ENST00000340477 TTC24A2A3L6 582 aaPredicted RBP19.32■□□□□ 0.68
SYNE4-202ENST00000340477 KCNK1O00180 336 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 TRAFD1O14545 582 aaPredicted RBP19.32■□□□□ 0.68
SYNE4-202ENST00000340477 SPINT1O43278 529 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 MTSS1O43312 755 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 LZTS3O60299 673 aaPredicted RBP19.32■□□□□ 0.68
SYNE4-202ENST00000340477 MMP20O60882 483 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 PAK4O96013 591 aaPredicted RBP19.32■□□□□ 0.68
SYNE4-202ENST00000340477 JCHAINP01591 159 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 WNT1P04628 370 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 HLA-DQB2P05538 268 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 ELFN1P0C7U0 828 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 THEGLP0DJG4 465 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 MMP12P39900 470 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 NXPH1P58417 271 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 LLGL1Q15334 1064 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 ZNF423Q2M1K9 1284 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 ALG1LQ6GMV1 187 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 NT5DC3Q86UY8 548 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 DCP2Q8IU60 420 aaKnown RBP19.32■□□□□ 0.68
SYNE4-202ENST00000340477 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.32■□□□□ 0.68
SYNE4-202ENST00000340477 LENG8Q96PV6 779 aaPredicted RBP19.32■□□□□ 0.68
SYNE4-202ENST00000340477 GUCA1BQ9UMX6 200 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 FNDC3AQ9Y2H6 1198 aaKnown RBP19.32■□□□□ 0.68
SYNE4-202ENST00000340477 PCDHB9Q9Y5E1 797 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 PCDHGC4Q9Y5F7 938 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 HS3ST3A1Q9Y663 406 aa19.32■□□□□ 0.68
SYNE4-202ENST00000340477 ASCC3Q8N3C0 2202 aaKnown RBP19.32■□□□□ 0.68
SYNE4-202ENST00000340477 WNT9AO14904 365 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 HTRA2O43464 458 aaPredicted RBP19.31■□□□□ 0.68
SYNE4-202ENST00000340477 CYP2A6P11509 494 aaPredicted RBP19.31■□□□□ 0.68
SYNE4-202ENST00000340477 CSRP1P21291 193 aaKnown RBP19.31■□□□□ 0.68
SYNE4-202ENST00000340477 NOVA1P51513 510 aaKnown RBP19.31■□□□□ 0.68
SYNE4-202ENST00000340477 EPHB1P54762 984 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 PPM1JQ5JR12 505 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 KYAT3Q6YP21 454 aaKnown RBP19.31■□□□□ 0.68
SYNE4-202ENST00000340477 USP45Q70EL2 814 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 DPPA4Q7L190 304 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 ZSWIM9Q86XI8 627 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 LRRN4Q8WUT4 740 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 UBE2Q2Q8WVN8 375 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 SPOCK2Q92563 424 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 ALS2CR12Q96Q35 445 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 ELF4Q99607 663 aaPredicted RBP19.31■□□□□ 0.68
SYNE4-202ENST00000340477 HEMGNQ9BXL5 484 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 ERVMER34-1Q9H9K5 563 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 PHTF1Q9UMS5 762 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 CA5BQ9Y2D0 317 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 EFR3BQ9Y2G0 817 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 PCDHGB2Q9Y5G2 931 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 RAI2Q9Y5P3 530 aa19.31■□□□□ 0.68
SYNE4-202ENST00000340477 CFAP69A5D8W1 941 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 H0Y8X5 98 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 FLRT2O43155 660 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 TJP3O95049 919 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 PGLSO95336 258 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 FTCDO95954 541 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 C6P13671 934 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 PTPN7P35236 360 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 RABIFP47224 123 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 LIG3P49916 1009 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 DSC2Q02487 901 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 TRAF2Q12933 501 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 GCNT7Q6ZNI0 430 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 BBS12Q6ZW61 710 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 NAXDQ8IW45 347 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 SETD7Q8WTS6 366 aaKnown RBP19.3■□□□□ 0.68
SYNE4-202ENST00000340477 HAUS1Q96CS2 278 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 IL12RB2Q99665 862 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 OSBPL8Q9BZF1 889 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 IL21RQ9HBE5 538 aa19.3■□□□□ 0.68
SYNE4-202ENST00000340477 LRRK1Q38SD2 2015 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 GOLGA6L9A6NEM1 432 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 HACD1B0YJ81 288 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 APOC4-APOC2K7ER74 178 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 TM4SF5O14894 197 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 APOC2P02655 101 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 PRKCGP05129 697 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 PECAM1P16284 738 aaPredicted RBP19.29■□□□□ 0.68
SYNE4-202ENST00000340477 ITIH2P19823 946 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 CLDN2P57739 230 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 ZBTB17Q13105 803 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms