RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 ARHGAP36Q6ZRI8 547 aa14.78□□□□□ -0.04
RET-201ENST00000340058 PIWIL4Q7Z3Z4 852 aaKnown RBP14.78□□□□□ -0.04
RET-201ENST00000340058 ZNF781Q8N8C0 355 aa14.78□□□□□ -0.04
RET-201ENST00000340058 NMD3Q96D46 503 aaKnown RBP14.78□□□□□ -0.04
RET-201ENST00000340058 YIPF2Q9BWQ6 316 aa14.78□□□□□ -0.04
RET-201ENST00000340058 OPTCQ9UBM4 332 aa14.78□□□□□ -0.04
RET-201ENST00000340058 PSAT1Q9Y617 370 aa14.78□□□□□ -0.04
RET-201ENST00000340058 F5P12259 2224 aa14.78□□□□□ -0.04
RET-201ENST00000340058 MYH3P11055 1940 aa14.77□□□□□ -0.04
RET-201ENST00000340058 A0A0U1RQF3 1178 aa14.77□□□□□ -0.04
RET-201ENST00000340058 NEDD8-MDP1E9PL57 170 aa14.77□□□□□ -0.04
RET-201ENST00000340058 CCL16O15467 120 aa14.77□□□□□ -0.04
RET-201ENST00000340058 CHRNGP07510 517 aa14.77□□□□□ -0.04
RET-201ENST00000340058 WASP42768 502 aa14.77□□□□□ -0.04
RET-201ENST00000340058 PSEN1P49768 467 aa14.77□□□□□ -0.04
RET-201ENST00000340058 FAM187BQ17R55 369 aa14.77□□□□□ -0.04
RET-201ENST00000340058 HPS6Q86YV9 775 aa14.77□□□□□ -0.04
RET-201ENST00000340058 BANPQ8N9N5 519 aa14.77□□□□□ -0.04
RET-201ENST00000340058 FAM156AQ8NDB6 213 aa14.77□□□□□ -0.04
RET-201ENST00000340058 VPS37AQ8NEZ2 397 aa14.77□□□□□ -0.04
RET-201ENST00000340058 CLHC1Q8NHS4 586 aa14.77□□□□□ -0.04
RET-201ENST00000340058 SMAD5Q99717 465 aaKnown RBP14.77□□□□□ -0.04
RET-201ENST00000340058 LGALS13Q9UHV8 139 aa14.77□□□□□ -0.04
RET-201ENST00000340058 NUMA1Q14980 2115 aa14.77□□□□□ -0.04
RET-201ENST00000340058 IRAK2O43187 625 aa14.77□□□□□ -0.04
RET-201ENST00000340058 HSPA1AP0DMV8 641 aaKnown RBP14.77□□□□□ -0.04
RET-201ENST00000340058 HSPA1BP0DMV9 641 aaKnown RBP14.77□□□□□ -0.04
RET-201ENST00000340058 RAP1GDS1P52306 607 aa14.77□□□□□ -0.04
RET-201ENST00000340058 ZNF252P-AS1Q0IIN9 211 aa14.77□□□□□ -0.04
RET-201ENST00000340058 AASDHQ4L235 1098 aaPredicted RBP14.77□□□□□ -0.04
RET-201ENST00000340058 FNDC3BQ53EP0 1204 aaKnown RBP14.77□□□□□ -0.04
RET-201ENST00000340058 TMEM198Q66K66 360 aa14.77□□□□□ -0.04
RET-201ENST00000340058 FBXL19Q6PCT2 694 aa14.77□□□□□ -0.04
RET-201ENST00000340058 FIBCD1Q8N539 461 aa14.77□□□□□ -0.04
RET-201ENST00000340058 TRIB2Q92519 343 aa14.77□□□□□ -0.04
RET-201ENST00000340058 THAP11Q96EK4 314 aa14.77□□□□□ -0.04
RET-201ENST00000340058 FAM120BQ96EK7 910 aaKnown RBP14.77□□□□□ -0.04
RET-201ENST00000340058 EMILIN2Q9BXX0 1053 aa14.77□□□□□ -0.04
RET-201ENST00000340058 KLHL4Q9C0H6 718 aa14.77□□□□□ -0.04
RET-201ENST00000340058 NMUR1Q9HB89 426 aa14.77□□□□□ -0.04
RET-201ENST00000340058 RCOR3Q9P2K3 495 aaPredicted RBP14.77□□□□□ -0.04
RET-201ENST00000340058 SLC2A6Q9UGQ3 507 aa14.77□□□□□ -0.04
RET-201ENST00000340058 ANKRD6Q9Y2G4 727 aa14.77□□□□□ -0.04
RET-201ENST00000340058 RAP2CQ9Y3L5 183 aa14.77□□□□□ -0.04
RET-201ENST00000340058 RAI2Q9Y5P3 530 aa14.77□□□□□ -0.04
RET-201ENST00000340058 CRHR1P34998 444 aa14.77□□□□□ -0.05
RET-201ENST00000340058 GRIA3P42263 894 aa14.77□□□□□ -0.05
RET-201ENST00000340058 CAMK2GQ13555 558 aaPredicted RBP14.77□□□□□ -0.05
RET-201ENST00000340058 GK5Q6ZS86 529 aa14.77□□□□□ -0.05
RET-201ENST00000340058 ARCQ7LC44 396 aa14.77□□□□□ -0.05
RET-201ENST00000340058 FBXO22Q8NEZ5 403 aa14.77□□□□□ -0.05
RET-201ENST00000340058 RIN3Q8TB24 985 aa14.77□□□□□ -0.05
RET-201ENST00000340058 RBBP8Q99708 897 aa14.77□□□□□ -0.05
RET-201ENST00000340058 KCTD14Q9BQ13 255 aaPredicted RBP14.77□□□□□ -0.05
RET-201ENST00000340058 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.77□□□□□ -0.05
RET-201ENST00000340058 SPG21Q9NZD8 308 aa14.77□□□□□ -0.05
RET-201ENST00000340058 VTI1BQ9UEU0 232 aa14.77□□□□□ -0.05
RET-201ENST00000340058 MYO5AQ9Y4I1 1855 aaKnown RBP14.77□□□□□ -0.05
RET-201ENST00000340058 MGEA5O60502 916 aa14.77□□□□□ -0.05
RET-201ENST00000340058 IL1BP01584 269 aa14.77□□□□□ -0.05
RET-201ENST00000340058 KRT6AP02538 564 aa14.77□□□□□ -0.05
RET-201ENST00000340058 KRT6BP04259 564 aa14.77□□□□□ -0.05
RET-201ENST00000340058 TSHRP16473 764 aa14.77□□□□□ -0.05
RET-201ENST00000340058 KRT6CP48668 564 aa14.77□□□□□ -0.05
RET-201ENST00000340058 CACNA2D1P54289 1103 aa14.77□□□□□ -0.05
RET-201ENST00000340058 GNA12Q03113 381 aa14.77□□□□□ -0.05
RET-201ENST00000340058 ABRQ12979 859 aa14.77□□□□□ -0.05
RET-201ENST00000340058 HECTD2Q5U5R9 776 aa14.77□□□□□ -0.05
RET-201ENST00000340058 RPS27LQ71UM5 84 aaKnown RBP14.77□□□□□ -0.05
RET-201ENST00000340058 GPRIN1Q7Z2K8 1008 aa14.77□□□□□ -0.05
RET-201ENST00000340058 ULK2Q8IYT8 1036 aa14.77□□□□□ -0.05
RET-201ENST00000340058 MRPL57Q9BQC6 102 aaKnown RBP14.77□□□□□ -0.05
RET-201ENST00000340058 BATF3Q9NR55 127 aa14.77□□□□□ -0.05
RET-201ENST00000340058 CNTN3Q9P232 1028 aa14.77□□□□□ -0.05
RET-201ENST00000340058 LIMD1Q9UGP4 676 aa14.77□□□□□ -0.05
RET-201ENST00000340058 FKBP6O75344 327 aa14.76□□□□□ -0.05
RET-201ENST00000340058 CNMDO75829 334 aa14.76□□□□□ -0.05
RET-201ENST00000340058 LRATO95237 230 aa14.76□□□□□ -0.05
RET-201ENST00000340058 MT-ND1P03886 318 aa14.76□□□□□ -0.05
RET-201ENST00000340058 POLR2EP19388 210 aaKnown RBP14.76□□□□□ -0.05
RET-201ENST00000340058 ACVRL1P37023 503 aa14.76□□□□□ -0.05
RET-201ENST00000340058 GLUD2P49448 558 aa14.76□□□□□ -0.05
RET-201ENST00000340058 VAC14Q08AM6 782 aa14.76□□□□□ -0.05
RET-201ENST00000340058 RALGDSQ12967 914 aa14.76□□□□□ -0.05
RET-201ENST00000340058 NAB1Q13506 487 aa14.76□□□□□ -0.05
RET-201ENST00000340058 TIGD2Q4W5G0 525 aa14.76□□□□□ -0.05
RET-201ENST00000340058 AGMOQ6ZNB7 445 aa14.76□□□□□ -0.05
RET-201ENST00000340058 DHFR2Q86XF0 187 aa14.76□□□□□ -0.05
RET-201ENST00000340058 FSTL5Q8N475 847 aaPredicted RBP14.76□□□□□ -0.05
RET-201ENST00000340058 C2orf73Q8N5S3 287 aaPredicted RBP14.76□□□□□ -0.05
RET-201ENST00000340058 OR13C4Q8NGS5 318 aa14.76□□□□□ -0.05
RET-201ENST00000340058 UCMAQ8WVF2 138 aa14.76□□□□□ -0.05
RET-201ENST00000340058 LZICQ8WZA0 190 aa14.76□□□□□ -0.05
RET-201ENST00000340058 GPR21Q99679 349 aa14.76□□□□□ -0.05
RET-201ENST00000340058 RGS17Q9UGC6 210 aaPredicted RBP14.76□□□□□ -0.05
RET-201ENST00000340058 ADAMTS5Q9UNA0 930 aa14.76□□□□□ -0.05
RET-201ENST00000340058 COL18A1P39060 1754 aa14.76□□□□□ -0.05
RET-201ENST00000340058 CCDC154A6NI56 674 aa14.76□□□□□ -0.05
RET-201ENST00000340058 CNTN5O94779 1100 aa14.76□□□□□ -0.05
RET-201ENST00000340058 RHOQP17081 205 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms