RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 C16orf96A6NNT2 1141 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 UPK3BL1B0FP48 263 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 ANKRD66B4E2M5 251 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 UPK3BL2E5RIL1 263 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 ALDH1A2O94788 518 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 DNTTP04053 509 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 CHRNA4P43681 627 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 CCR3P51677 355 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 METAP1P53582 386 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 EPHB1P54762 984 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 CDH17Q12864 832 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 GALNT3Q14435 633 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 QPCTQ16769 361 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 ERCC6LQ2NKX8 1250 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 ERN2Q76MJ5 926 aaKnown RBP17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 PARS2Q7L3T8 475 aaKnown RBP17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 NDUFAF2Q8N183 169 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 EIF1ADQ8N9N8 165 aaKnown RBP17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 OR52K1Q8NGK4 314 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 FAM131CQ96AQ9 280 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 RMDN1Q96DB5 314 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 FOXP3Q9BZS1 431 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 ZDHHC18Q9NUE0 388 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 TTC28Q96AY4 2481 aa17.99■□□□□ 0.47
SDCBP2-201ENST00000339987 A0A0J9YYE9 177 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 PPFIA2O75334 1257 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 TRBC1P01850 177 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 TIMP2P16035 220 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 NFKBIAP25963 317 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 TNFRSF8P28908 595 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 DRD3P35462 400 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 GRIA1P42261 906 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 CXCL12P48061 93 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 NEK3P51956 506 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 PLTPP55058 493 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 CCDC15Q0P6D6 951 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 SFSWAPQ12872 951 aaKnown RBP17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 CBLBQ13191 982 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 UGP2Q16851 508 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 POM121L1PQ3SYA9 428 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 TTC31Q49AM3 519 aaPredicted RBP17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 CAND1Q86VP6 1230 aaKnown RBP17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 RASSF3Q86WH2 238 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 ZCCHC9Q8N567 271 aaKnown RBP17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 SLC25A41Q8N5S1 370 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 CAMKK1Q8N5S9 505 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 AADATQ8N5Z0 425 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 FBXO25Q8TCJ0 367 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 SERPINB12Q96P63 405 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 MCCC1Q96RQ3 725 aaPredicted RBP17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 SLC6A17Q9H1V8 727 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 V9GYY5 206 aaPredicted RBP17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 BDP1A6H8Y1 2624 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 GOLGA8MH3BSY2 632 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 TNFRSF10AO00220 468 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 APBB3O95704 486 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 MAGEA3P43357 314 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 CARSP49589 748 aaKnown RBP17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 CNTN1Q12860 1018 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 KIAA1324Q6UXG2 1013 aaKnown RBP17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 USP30Q70CQ3 517 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 GPR161Q8N6U8 529 aaKnown RBP17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 DNAAF3Q8N9W5 541 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 HMGB4Q8WW32 186 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 RAB7BQ96AH8 199 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 PBXIP1Q96AQ6 731 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 SCRN2Q96FV2 425 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 HHIPQ96QV1 700 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 LYSMD1Q96S90 227 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 SRPK1Q96SB4 655 aaKnown RBP17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 EPC1Q9H2F5 836 aa17.98■□□□□ 0.47
SDCBP2-201ENST00000339987 CAPN8A6NHC0 703 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 SLC7A4O43246 635 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 ADRB3P13945 408 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 XPAP23025 273 aaPredicted RBP17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 ECHS1P30084 290 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 P2RY2P41231 377 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 NPY2RP49146 381 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 ARL4CP56559 192 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 MSLNQ13421 630 aaPredicted RBP17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 PIP5KL1Q5T9C9 394 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 ARMC3Q5W041 872 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 FBXL19Q6PCT2 694 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 USP45Q70EL2 814 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 TTC7BQ86TV6 843 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 KBTBD6Q86V97 674 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 CACUL1Q86Y37 369 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 HDDC3Q8N4P3 179 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 FBXL6Q8N531 539 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 IFT81Q8WYA0 676 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 OMDQ99983 421 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 PHACTR1Q9C0D0 580 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 MAGEE1Q9HCI5 957 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 HACD3Q9P035 362 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 USP36Q9P275 1121 aaKnown RBP17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 EBF1Q9UH73 591 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 FZD4Q9ULV1 537 aa17.97■□□□□ 0.47
SDCBP2-201ENST00000339987 A0A1W2PP55 124 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 AP1G1O43747 822 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms