RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 GIMAP7Q8NHV1 300 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 PDCD6IPQ8WUM4 868 aaKnown RBP23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 VWCEQ96DN2 955 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 IFT43Q96FT9 208 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 CWH43Q9H720 699 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 IGSF5Q9NSI5 407 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 NOP53Q9NZM5 478 aaKnown RBP23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 DNMT3LQ9UJW3 386 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 PCDHGC4Q9Y5F7 938 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 SPO11Q9Y5K1 396 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 PAMP19021 973 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 SLC12A2P55011 1212 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 FRMD7Q6ZUT3 714 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 TSNARE1Q96NA8 513 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 UBE2OQ9C0C9 1292 aaKnown RBP23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 POMKQ9H5K3 350 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 GPAMQ9HCL2 828 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 VPS45Q9NRW7 570 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 SLC7A8Q9UHI5 535 aa23.25■■□□□ 1.31
CLPTM1-201ENST00000337392 SNAP91O60641 907 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 CPOXP36551 454 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 CDKN1CP49918 316 aaPredicted RBP23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 EPHB1P54762 984 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 ZXDBP98169 803 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 GNA12Q03113 381 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 IL10RBQ08334 325 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 FSCBQ5H9T9 825 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 EPGNQ6UW88 154 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 LRRC43Q8N309 656 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 POLR1EQ9GZS1 481 aaKnown RBP23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 PDFQ9HBH1 243 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 SPTBN5Q9NRC6 3674 aaKnown RBP23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 H3BNC9 293 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 AP3B1O00203 1094 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 SKAP2O75563 359 aaPredicted RBP23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 GOT2P00505 430 aaKnown RBP23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 CA8P35219 290 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 NXNQ6DKJ4 435 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 ULK2Q8IYT8 1036 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 HIPK4Q8NE63 616 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 ARNT2Q9HBZ2 717 aa23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.24■■□□□ 1.31
CLPTM1-201ENST00000337392 PITPNM1O00562 1244 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 ZNF189O75820 626 aaPredicted RBP23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 STC2O76061 302 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 KLHL2O95198 593 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 TFEBP19484 476 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 ELF1P32519 619 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 PTDSS1P48651 473 aaKnown RBP23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 CDK18Q07002 472 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 UGP2Q16851 508 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 USP41Q3LFD5 358 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 HECTD2Q5U5R9 776 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 SLC8B1Q6J4K2 584 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 IGSF21Q96ID5 467 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 PANX3Q96QZ0 392 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 TRPC7Q9HCX4 862 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 NRG2O14511 850 aaPredicted RBP23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 GRID2O43424 1007 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 COL6A1P12109 1028 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 GNAZP19086 355 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 DEFB103AP81534 67 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 LSM12Q3MHD2 195 aaKnown RBP23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 PARP15Q460N3 678 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 TMPRSS6Q8IU80 811 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 NRG4Q8WWG1 115 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 ALG9Q9H6U8 611 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 DNAJC28Q9NX36 388 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 MTRRQ9UBK8 725 aa23.23■■□□□ 1.31
CLPTM1-201ENST00000337392 LOC285095A0A1B0GVY8 99 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 CCDC162PA2VCL2 907 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 MROH6A6NGR9 719 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 H7C4K7 107 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 TMCO4Q5TGY1 634 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 ZNF549Q6P9A3 640 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 CATSPER2Q96P56 530 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 DRC3Q9H069 523 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 ILKAPQ9H0C8 392 aaPredicted RBP23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 SLC24A3Q9HC58 644 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 BPIFA1Q9NP55 256 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 NSMCE4AQ9NXX6 385 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 LRRC14BA6NHZ5 514 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 TBX10O75333 385 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 S1PR4O95977 384 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 AOC1P19801 751 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 MSX2P35548 267 aaPredicted RBP23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 NAIF1Q69YI7 327 aaPredicted RBP23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 LRRC49Q8IUZ0 686 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 OR6K2Q8NGY2 324 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 TCF7L2Q9NQB0 619 aa23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 AGO1Q9UL18 857 aaKnown RBP23.22■■□□□ 1.31
CLPTM1-201ENST00000337392 PAX7P23759 505 aa23.21■■□□□ 1.31
CLPTM1-201ENST00000337392 RING1Q06587 406 aa23.21■■□□□ 1.31
CLPTM1-201ENST00000337392 FAM91A1Q658Y4 838 aa23.21■■□□□ 1.31
CLPTM1-201ENST00000337392 TRIM68Q6AZZ1 485 aa23.21■■□□□ 1.31
CLPTM1-201ENST00000337392 RIPOR1Q6ZS17 1223 aa23.21■■□□□ 1.31
CLPTM1-201ENST00000337392 SCUBE1Q8IWY4 988 aa23.21■■□□□ 1.31
CLPTM1-201ENST00000337392 RMDN1Q96DB5 314 aa23.21■■□□□ 1.31
CLPTM1-201ENST00000337392 LENG8Q96PV6 779 aaPredicted RBP23.21■■□□□ 1.31
CLPTM1-201ENST00000337392 FAM167BQ9BTA0 163 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms