RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 PLXNA3P51805 1871 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 OR51F1A6NGY5 319 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 INPPL1O15357 1258 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 MAP3K13O43283 966 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 SLC10A3P09131 477 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 PRKAR2AP13861 404 aaKnown RBP17.81■□□□□ 0.44
LRCH3-201ENST00000334859 XRCC1P18887 633 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-201ENST00000334859 ARSDP51689 593 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 PFKPQ01813 784 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 IHHQ14623 411 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 FBXL22Q6P050 247 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 PGAM4Q8N0Y7 254 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 AFAP1L2Q8N4X5 818 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 CEP70Q8NHQ1 597 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 RPRD1AQ96P16 312 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-201ENST00000334859 FAM193BQ96PV7 902 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-201ENST00000334859 EFCAB1Q9HAE3 211 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 MARCH2Q9P0N8 246 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 RAMP2O60895 175 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 TADA2AO75478 443 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 SNUPNO95149 360 aaKnown RBP17.81■□□□□ 0.44
LRCH3-201ENST00000334859 ATXN3P54252 364 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-201ENST00000334859 MRPS22P82650 360 aaKnown RBP17.81■□□□□ 0.44
LRCH3-201ENST00000334859 POLD3Q15054 466 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-201ENST00000334859 EML3Q32P44 896 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 CTXN3Q4LDR2 81 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 PIGGQ5H8A4 983 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 SLC24A5Q71RS6 500 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 RTN4RL1Q86UN2 441 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-201ENST00000334859 COLGALT2Q8IYK4 626 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 KLHDC9Q8NEP7 349 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 ANKRD49Q8WVL7 239 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 B3GALT6Q96L58 329 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 TUBGCP5Q96RT8 1024 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 NPAS2Q99743 824 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 EML4Q9HC35 981 aaKnown RBP17.81■□□□□ 0.44
LRCH3-201ENST00000334859 RGS18Q9NS28 235 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 MARCH4Q9P2E8 410 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-201ENST00000334859 TLL2Q9Y6L7 1015 aa17.81■□□□□ 0.44
LRCH3-201ENST00000334859 STX16-NPEPL1H3BU86 382 aa17.8■□□□□ 0.44
LRCH3-201ENST00000334859 SLC7A4O43246 635 aa17.8■□□□□ 0.44
LRCH3-201ENST00000334859 GJB3O75712 270 aa17.8■□□□□ 0.44
LRCH3-201ENST00000334859 PAPSS2O95340 614 aaPredicted RBP17.8■□□□□ 0.44
LRCH3-201ENST00000334859 RBP1P09455 135 aa17.8■□□□□ 0.44
LRCH3-201ENST00000334859 ARSAP15289 507 aa17.8■□□□□ 0.44
LRCH3-201ENST00000334859 ELNP15502 786 aa17.8■□□□□ 0.44
LRCH3-201ENST00000334859 YWHAQP27348 245 aa17.8■□□□□ 0.44
LRCH3-201ENST00000334859 NKX3-2P78367 333 aa17.8■□□□□ 0.44
LRCH3-201ENST00000334859 FAM26DQ5JW98 314 aa17.8■□□□□ 0.44
LRCH3-201ENST00000334859 CUZD1Q86UP6 607 aa17.8■□□□□ 0.44
LRCH3-201ENST00000334859 PIM3Q86V86 326 aa17.8■□□□□ 0.44
LRCH3-201ENST00000334859 PHC3Q8NDX5 983 aa17.8■□□□□ 0.44
LRCH3-201ENST00000334859 MAELQ96JY0 434 aaKnown RBP17.8■□□□□ 0.44
LRCH3-201ENST00000334859 ALG9Q9H6U8 611 aa17.8■□□□□ 0.44
LRCH3-201ENST00000334859 VWA7Q9Y334 891 aa17.8■□□□□ 0.44
LRCH3-201ENST00000334859 KCTD3Q9Y597 815 aa17.8■□□□□ 0.44
LRCH3-201ENST00000334859 RNASEH1O60930 286 aaKnown RBP17.79■□□□□ 0.44
LRCH3-201ENST00000334859 SMIM24O75264 130 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 SLC4A1P02730 911 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 CCNHP51946 323 aaPredicted RBP17.79■□□□□ 0.44
LRCH3-201ENST00000334859 CDKN2DP55273 166 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 SREBF2Q12772 1141 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 MSLNQ13421 630 aaPredicted RBP17.79■□□□□ 0.44
LRCH3-201ENST00000334859 CEACAM7Q14002 265 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 TRIP4Q15650 581 aaPredicted RBP17.79■□□□□ 0.44
LRCH3-201ENST00000334859 ZNF423Q2M1K9 1284 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 GPR158Q5T848 1215 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 CCSAPQ6IQ19 270 aaPredicted RBP17.79■□□□□ 0.44
LRCH3-201ENST00000334859 GK5Q6ZS86 529 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 PQLC1Q8N2U9 271 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 PGBD5Q8N414 524 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 PCSK9Q8NBP7 692 aaKnown RBP17.79■□□□□ 0.44
LRCH3-201ENST00000334859 FATE1Q969F0 183 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 FAR2Q96K12 515 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 MFSD1Q9H3U5 465 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 TNFRSF12AQ9NP84 129 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 NMRK2Q9NPI5 230 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 ZDHHC7Q9NXF8 308 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 PDP2Q9P2J9 529 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 CRYL1Q9Y2S2 319 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 IGLV3-10A0A075B6K4 115 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 SLC12A8A0AV02 714 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 MROH6A6NGR9 719 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 TXNDC9O14530 226 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 EOMESO95936 686 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 CKBP12277 381 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 OR1E1P30953 314 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 SATB1Q01826 763 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 MED21Q13503 144 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 ACAP2Q15057 778 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 ARMC3Q5W041 872 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 BLOC1S5Q8TDH9 187 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 LINC01599Q8WXQ3 324 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 EXT2Q93063 718 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 IFT43Q96FT9 208 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 UBXN10Q96LJ8 280 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 SEMA3CQ99985 751 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 SLC27A5Q9Y2P5 690 aa17.79■□□□□ 0.44
LRCH3-201ENST00000334859 MTF2Q9Y483 593 aaPredicted RBP17.79■□□□□ 0.44
LRCH3-201ENST00000334859 FRMPD3Q5JV73 1810 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms