RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CROTQ9UKG9 612 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 ENTPD4Q9Y227 616 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 KCNE2Q9Y6J6 123 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 KRT87PA6NCN2 255 aa15.08■□□□□ 0.01
C9orf47-201ENST00000334490 MRASO14807 208 aa15.08■□□□□ 0.01
C9orf47-201ENST00000334490 MATN3O15232 486 aa15.08■□□□□ 0.01
C9orf47-201ENST00000334490 GSTM1P09488 218 aa15.08■□□□□ 0.01
C9orf47-201ENST00000334490 TSPAN8P19075 237 aa15.08■□□□□ 0.01
C9orf47-201ENST00000334490 SERPINB3P29508 390 aa15.08■□□□□ 0.01
C9orf47-201ENST00000334490 PACS1Q6VY07 963 aa15.08■□□□□ 0.01
C9orf47-201ENST00000334490 MRPL57Q9BQC6 102 aaKnown RBP15.08■□□□□ 0.01
C9orf47-201ENST00000334490 NDEL1Q9GZM8 345 aa15.08■□□□□ 0.01
C9orf47-201ENST00000334490 XPR1Q9UBH6 696 aa15.08■□□□□ 0.01
C9orf47-201ENST00000334490 SALL4Q9UJQ4 1053 aa15.08■□□□□ 0.01
C9orf47-201ENST00000334490 PSME2Q9UL46 239 aa15.08■□□□□ 0.01
C9orf47-201ENST00000334490 IRAK2O43187 625 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 ULK1O75385 1050 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 MYBL2P10244 700 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 RAB30Q15771 203 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 CYP4Z1Q86W10 505 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 KCTD14Q9BQ13 255 aaPredicted RBP15.08■□□□□ 0
C9orf47-201ENST00000334490 ACAT2Q9BWD1 397 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 SNX15Q9NRS6 342 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 SLC12A4Q9UP95 1085 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 ARFGEF2Q9Y6D5 1785 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 LBPP18428 481 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 POU1F1P28069 291 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 TNFRSF8P28908 595 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 NDST2P52849 883 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 C21orf59P57076 290 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 RPS24P62847 133 aaKnown RBP15.08■□□□□ 0
C9orf47-201ENST00000334490 HNRNPDQ14103 355 aaKnown RBP15.08■□□□□ 0
C9orf47-201ENST00000334490 TJAP1Q5JTD0 557 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 SH3PXD2AQ5TCZ1 1133 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 CMC1Q7Z7K0 106 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 RAVER1Q8IY67 606 aaKnown RBP15.08■□□□□ 0
C9orf47-201ENST00000334490 OR10G6Q8NH81 332 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 AP2M1Q96CW1 435 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 FERD3LQ96RJ6 166 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 ARMCX1Q9P291 453 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 ARIH1Q9Y4X5 557 aaPredicted RBP15.08■□□□□ 0
C9orf47-201ENST00000334490 RGPD5Q99666 1765 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 GSAPA4D1B5 854 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 RPP40O75818 363 aaKnown RBP15.08■□□□□ 0
C9orf47-201ENST00000334490 PFKMP08237 780 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 ATP6V1B2P21281 511 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 RFC2P35250 354 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 SEC13P55735 322 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 DAB2P98082 770 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 TBL3Q12788 808 aaKnown RBP15.08■□□□□ 0
C9orf47-201ENST00000334490 PTP4A2Q12974 167 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 FUKQ8N0W3 1084 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 PIWIL2Q8TC59 973 aaKnown RBP15.08■□□□□ 0
C9orf47-201ENST00000334490 HEXDCQ8WVB3 486 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 COL26A1Q96A83 441 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 SHISA4Q96DD7 197 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 NMUR1Q9HB89 426 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 RXFP1Q9HBX9 757 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 CHRAC1Q9NRG0 131 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 SCN3BQ9NY72 215 aa15.08■□□□□ 0
C9orf47-201ENST00000334490 NDUFB5O43674 189 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 PEX11AO75192 247 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 TPSB2P20231 275 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 HPCAL1P37235 193 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 VAC14Q08AM6 782 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 TPSAB1Q15661 275 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 TXNDC8Q6A555 127 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 SERINC5Q86VE9 423 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 TNS4Q8IZW8 715 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 ZNF567Q8N184 647 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 BEND7Q8N7W2 519 aaPredicted RBP15.07■□□□□ 0
C9orf47-201ENST00000334490 CDYL2Q8N8U2 506 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 SPPL2AQ8TCT8 520 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 HEPHQ9BQS7 1158 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 GBA3Q9H227 469 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 RHOJQ9H4E5 214 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 ABCB8Q9NUT2 735 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 AJAP1Q9UKB5 411 aaPredicted RBP15.07■□□□□ 0
C9orf47-201ENST00000334490 FZD10Q9ULW2 581 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 C9IYK1 514 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 FAM47E-STBD1D6RA91 191 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 RGS20O76081 388 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 MLYCDO95822 493 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 COX7A2P14406 83 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 AP1S1P61966 158 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 SLC20A2Q08357 652 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 TRIM32Q13049 653 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 RCN1Q15293 331 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 PIWIL4Q7Z3Z4 852 aaKnown RBP15.07■□□□□ 0
C9orf47-201ENST00000334490 HERVK_113Q902F9 699 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 FAM83DQ9H4H8 585 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 SLC40A1Q9NP59 571 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 SASH3O75995 380 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 NQO1P15559 274 aaKnown RBP15.07■□□□□ 0
C9orf47-201ENST00000334490 GRIA4P48058 902 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 CPSF6Q16630 551 aaKnown RBP eCLIP15.07■□□□□ 0
C9orf47-201ENST00000334490 XKR6Q5GH73 641 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 ZDHHC20Q5W0Z9 365 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 SNX32Q86XE0 403 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 LRRC57Q8N9N7 239 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms