RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CSPG4P5Q96PW8 444 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 PBX4Q9BYU1 374 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 KIAA1522Q9P206 1035 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-201ENST00000334136 CYTH4Q9UIA0 394 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 SNX10Q9Y5X0 201 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 hCG_1818297A0A087WSY0 165 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 SAC3D1A6NKF1 404 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 HNRNPRO43390 633 aaKnown RBP11.89□□□□□ -0.51
HDAC6-201ENST00000334136 GRK2P25098 689 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 GABRB2P47870 512 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 PYROXD2Q8N2H3 581 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 ALLCQ8N6M5 410 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 RNF217Q8TC41 542 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 GORASP1Q9BQQ3 440 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 ZBP1Q9H171 429 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 PRR23AA6NEV1 266 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 HACD1B0YJ81 288 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 RHOQP17081 205 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 HADHBP55084 474 aaKnown RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 SFSWAPQ12872 951 aaKnown RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 PDK3Q15120 406 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 KIAA0319Q5VV43 1072 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 TRAF7Q6Q0C0 670 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 SERPINA13PQ6UXR4 307 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 CELF5Q8N6W0 485 aaKnown RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 NETO2Q8NC67 525 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 DDHD1Q8NEL9 900 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 PSMG2Q969U7 264 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 CADM1Q9BY67 442 aaKnown RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 SMOC2Q9H3U7 446 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 ACSS3Q9H6R3 686 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 EBF2Q9HAK2 575 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 NMUR1Q9HB89 426 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 A0A0G2JMZ2 1700 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 A0A1B0GVM2 712 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 TCRBV9S1A1TA0A576 114 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 ZNF840PA6NDX5 716 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 TCAF2A6NFQ2 919 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 RNF103O00237 685 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 ALOX15BO15296 676 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 FAM155BO75949 473 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 SERPINB8P50452 374 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 NTHL1P78549 312 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 ATP1A4Q13733 1029 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 ADGRF1Q5T601 910 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 PTAR1Q7Z6K3 402 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 PIWIL1Q96J94 861 aaKnown RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 KCTD15Q96SI1 283 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 NPY6RQ99463 290 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 TMEM109Q9BVC6 243 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 ZDHHC7Q9NXF8 308 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 RCOR3Q9P2K3 495 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 LYPLA1O75608 230 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 SRP72O76094 671 aaKnown RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 SEC24AO95486 1093 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 IGSF6O95976 241 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 SERPINE1P05121 402 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 ABHD2P08910 425 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 CAPRIN1Q14444 709 aaKnown RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 DHDDSQ86SQ9 333 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 LINC00523Q86TU6 105 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 SETD3Q86TU7 594 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 CLVS1Q8IUQ0 354 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 LRRC49Q8IUZ0 686 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 KIAA2013Q8IYS2 634 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 PCYOX1LQ8NBM8 494 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 PPHLN1Q8NEY8 458 aaKnown RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 ST13P5Q8NFI4 369 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-201ENST00000334136 BPIFB1Q8TDL5 484 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 CEP295NLQ96MC4 621 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 PHACTR1Q9C0D0 580 aa11.88□□□□□ -0.51
HDAC6-201ENST00000334136 F8W8V4 182 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 H3BNC9 293 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 IGHA2P01877 340 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 S100BP04271 92 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-201ENST00000334136 IRS1P35568 1242 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 ERVK-21P61565 698 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 ACSBG2Q5FVE4 666 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 TCEAL5Q5H9L2 206 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 CWF19L1Q69YN2 538 aaKnown RBP11.87□□□□□ -0.51
HDAC6-201ENST00000334136 SMG9Q9H0W8 520 aaKnown RBP11.87□□□□□ -0.51
HDAC6-201ENST00000334136 TAS2R1Q9NYW7 299 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 TRHDEQ9UKU6 1024 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 RUVBL2Q9Y230 463 aaKnown RBP11.87□□□□□ -0.51
HDAC6-201ENST00000334136 H3BQ06 376 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-201ENST00000334136 SUPT7LO94864 414 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 TNFAIP8O95379 198 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 LYNP07948 512 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 GDI1P31150 447 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 USP46P62068 366 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 FUT11Q495W5 492 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 AGKQ53H12 422 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 CCDC92Q53HC0 331 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-201ENST00000334136 PPP1R15BQ5SWA1 713 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 CACUL1Q86Y37 369 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 CHPFQ8IZ52 775 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 ZNF483Q8TF39 744 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-201ENST00000334136 HAPLN3Q96S86 360 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 VAT1Q99536 393 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms