RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 SPANXN3Q5MJ09 141 aa23.42■■□□□ 1.34
TSEN54-201ENST00000333213 ESRP1Q6NXG1 681 aaKnown RBP23.42■■□□□ 1.34
TSEN54-201ENST00000333213 DPY19L3Q6ZPD9 716 aa23.42■■□□□ 1.34
TSEN54-201ENST00000333213 PDCD6IPQ8WUM4 868 aaKnown RBP23.42■■□□□ 1.34
TSEN54-201ENST00000333213 CCT8L2Q96SF2 557 aa23.42■■□□□ 1.34
TSEN54-201ENST00000333213 PAFAH2Q99487 392 aa23.42■■□□□ 1.34
TSEN54-201ENST00000333213 MTG2Q9H4K7 406 aa23.42■■□□□ 1.34
TSEN54-201ENST00000333213 UGT1A7Q9HAW7 530 aa23.42■■□□□ 1.34
TSEN54-201ENST00000333213 UGT1A10Q9HAW8 530 aa23.42■■□□□ 1.34
TSEN54-201ENST00000333213 UGT1A8Q9HAW9 530 aa23.42■■□□□ 1.34
TSEN54-201ENST00000333213 SLC17A6Q9P2U8 582 aa23.42■■□□□ 1.34
TSEN54-201ENST00000333213 FETUBQ9UGM5 382 aa23.42■■□□□ 1.34
TSEN54-201ENST00000333213 SLC8A1P32418 973 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 SOX9P48436 509 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 SNRPD1P62314 119 aaKnown RBP23.41■■□□□ 1.34
TSEN54-201ENST00000333213 SKIDA1Q1XH10 827 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 AAK1Q2M2I8 961 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 KLHL38Q2WGJ6 581 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 ICE2Q659A1 982 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 TDRPQ86YL5 185 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 PCDH20Q8N6Y1 951 aaKnown RBP23.41■■□□□ 1.34
TSEN54-201ENST00000333213 TERB1Q8NA31 727 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 OR2A12Q8NGT7 310 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 FBRSL1Q9HCM7 1045 aaKnown RBP23.41■■□□□ 1.34
TSEN54-201ENST00000333213 TREX1Q9NSU2 369 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 PCDHB9Q9Y5E1 797 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 SPO11Q9Y5K1 396 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 ANKRD66B4E2M5 251 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 LDB2O43679 373 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 CDH16O75309 829 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 FAM155BO75949 473 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 ERVK-10P10266 1014 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 CCNHP51946 323 aaPredicted RBP23.41■■□□□ 1.34
TSEN54-201ENST00000333213 SMAD4Q13485 552 aaKnown RBP23.41■■□□□ 1.34
TSEN54-201ENST00000333213 MYLK3Q32MK0 819 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 CARD16Q5EG05 197 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 OTUD6BQ8N6M0 293 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.41■■□□□ 1.34
TSEN54-201ENST00000333213 CHST14Q8NCH0 376 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 PPHLN1Q8NEY8 458 aaKnown RBP23.41■■□□□ 1.34
TSEN54-201ENST00000333213 LPCAT1Q8NF37 534 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 DCAKDQ8WVC6 231 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 RANBP9Q96S59 729 aa23.41■■□□□ 1.34
TSEN54-201ENST00000333213 NOVA2Q9UNW9 492 aaKnown RBP23.41■■□□□ 1.34
TSEN54-201ENST00000333213 MROH6A6NGR9 719 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 AURKAO14965 403 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 RGS16O15492 202 aaPredicted RBP23.4■■□□□ 1.34
TSEN54-201ENST00000333213 HTRA2O43464 458 aaPredicted RBP23.4■■□□□ 1.34
TSEN54-201ENST00000333213 GSRP00390 522 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 ATP5BP06576 529 aaKnown RBP23.4■■□□□ 1.34
TSEN54-201ENST00000333213 ALADP13716 330 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 ARNTP27540 789 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 SEPT6Q14141 434 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 SKIV2LQ15477 1246 aaKnown RBP23.4■■□□□ 1.34
TSEN54-201ENST00000333213 ITPRIPL2Q3MIP1 535 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 ADGRD1Q6QNK2 874 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 ZSWIM9Q86XI8 627 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 CNPY4Q8N129 248 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 RYBPQ8N488 228 aaPredicted RBP23.4■■□□□ 1.34
TSEN54-201ENST00000333213 PPM1NQ8N819 430 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 ZNF366Q8N895 744 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 BLOC1S5Q8TDH9 187 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 PTCD2Q8WV60 388 aaKnown RBP23.4■■□□□ 1.34
TSEN54-201ENST00000333213 SLC44A1Q8WWI5 657 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 TLCD1Q96CP7 247 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 RMDN1Q96DB5 314 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 CERS2Q96G23 380 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 MRM3Q9HC36 420 aaKnown RBP23.4■■□□□ 1.34
TSEN54-201ENST00000333213 LGALS13Q9UHV8 139 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 SLC24A2Q9UI40 661 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 HCN2Q9UL51 889 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 KCTD3Q9Y597 815 aa23.4■■□□□ 1.34
TSEN54-201ENST00000333213 SRPRAP08240 638 aaKnown RBP23.39■■□□□ 1.34
TSEN54-201ENST00000333213 LIG3P49916 1009 aa23.39■■□□□ 1.34
TSEN54-201ENST00000333213 VASPP50552 380 aaPredicted RBP23.39■■□□□ 1.34
TSEN54-201ENST00000333213 CNGA3Q16281 694 aa23.39■■□□□ 1.34
TSEN54-201ENST00000333213 QPCTQ16769 361 aa23.39■■□□□ 1.34
TSEN54-201ENST00000333213 PIH1D2Q8WWB5 315 aa23.39■■□□□ 1.34
TSEN54-201ENST00000333213 BRD9Q9H8M2 597 aa23.39■■□□□ 1.34
TSEN54-201ENST00000333213 ARL5AQ9Y689 179 aa23.39■■□□□ 1.34
TSEN54-201ENST00000333213 HEATR9A2RTY3 570 aa23.39■■□□□ 1.33
TSEN54-201ENST00000333213 PGLSO95336 258 aa23.39■■□□□ 1.33
TSEN54-201ENST00000333213 ASLP04424 464 aa23.39■■□□□ 1.33
TSEN54-201ENST00000333213 PPP2R2AP63151 447 aa23.39■■□□□ 1.33
TSEN54-201ENST00000333213 BCL2L1Q07817 233 aa23.39■■□□□ 1.33
TSEN54-201ENST00000333213 CROCCP2Q86T23 111 aa23.39■■□□□ 1.33
TSEN54-201ENST00000333213 LRRC6Q86X45 466 aa23.39■■□□□ 1.33
TSEN54-201ENST00000333213 CTAGE3PQ8IX95 158 aa23.39■■□□□ 1.33
TSEN54-201ENST00000333213 MDGA1Q8NFP4 955 aa23.39■■□□□ 1.33
TSEN54-201ENST00000333213 OR13J1Q8NGT2 312 aa23.39■■□□□ 1.33
TSEN54-201ENST00000333213 PTPRN2Q92932 1015 aa23.39■■□□□ 1.33
TSEN54-201ENST00000333213 CNOT10Q9H9A5 744 aaKnown RBP23.39■■□□□ 1.33
TSEN54-201ENST00000333213 PPANQ9NQ55 473 aaKnown RBP23.39■■□□□ 1.33
TSEN54-201ENST00000333213 MUC22E2RYF6 1773 aaPredicted RBP23.38■■□□□ 1.33
TSEN54-201ENST00000333213 A0A0U1RQS6 177 aa23.38■■□□□ 1.33
TSEN54-201ENST00000333213 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.38■■□□□ 1.33
TSEN54-201ENST00000333213 GOLGA8TH3BQL2 631 aa23.38■■□□□ 1.33
TSEN54-201ENST00000333213 ARCN1P48444 511 aaKnown RBP23.38■■□□□ 1.33
TSEN54-201ENST00000333213 FRG1Q14331 258 aaKnown RBP23.38■■□□□ 1.33
TSEN54-201ENST00000333213 PTPRCAPQ14761 206 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms