RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 PRPSAP1Q14558 356 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 SAMD4BQ5PRF9 694 aaKnown RBP18.26■□□□□ 0.51
PKP3-201ENST00000331563 SNX29P2Q8IUI4 249 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 FAM20CQ8IXL6 584 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 GOLM1Q8NBJ4 401 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 ARNTL2Q8WYA1 636 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 PIWIL1Q96J94 861 aaKnown RBP18.26■□□□□ 0.51
PKP3-201ENST00000331563 SNRNP25Q9BV90 132 aaKnown RBP18.26■□□□□ 0.51
PKP3-201ENST00000331563 RETREG1Q9H6L5 497 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 GMPR2Q9P2T1 348 aaKnown RBP18.26■□□□□ 0.51
PKP3-201ENST00000331563 MORF4L1Q9UBU8 362 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 GOLGA8CPA6NN73 597 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 CELF2O95319 508 aaKnown RBP18.26■□□□□ 0.51
PKP3-201ENST00000331563 ASPAP45381 313 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 SLC7A2P52569 658 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 TRNP1Q6NT89 227 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 DHRSXQ8N5I4 330 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 MFSD2AQ8NA29 543 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 NETO2Q8NC67 525 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 SEPT8Q92599 483 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 NRBF2Q96F24 287 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 GLT1D1Q96MS3 346 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 UHRF1Q96T88 793 aaPredicted RBP18.26■□□□□ 0.51
PKP3-201ENST00000331563 PDZD7Q9H5P4 517 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 OAZ3Q9UMX2 235 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 AP4E1Q9UPM8 1137 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 SATB2Q9UPW6 733 aa18.26■□□□□ 0.51
PKP3-201ENST00000331563 TRIM64BA6NI03 449 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 MRASO14807 208 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 SRP72O76094 671 aaKnown RBP18.25■□□□□ 0.51
PKP3-201ENST00000331563 ALOX5P09917 674 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 IL10P22301 178 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 IDUAP35475 653 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 DNASE1L3Q13609 305 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 TTLL4Q14679 1199 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 SLC36A3Q495N2 470 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 PRAMEF19Q5SWL8 479 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 RNF38Q9H0F5 515 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 MARCH7Q9H992 704 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 NANOGQ9H9S0 305 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 IL1RL2Q9HB29 575 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 CRNNQ9UBG3 495 aaPredicted RBP18.25■□□□□ 0.51
PKP3-201ENST00000331563 GINS2Q9Y248 185 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 SLC27A5Q9Y2P5 690 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 C2CD4BA6NLJ0 364 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 CLDN25C9JDP6 229 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 DLGAP1O14490 977 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 RGS13O14921 159 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 TRIM24O15164 1050 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 VTNP04004 478 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 GNL1P36915 607 aaPredicted RBP18.25■□□□□ 0.51
PKP3-201ENST00000331563 LIMK2P53671 638 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 AP3M2P53677 418 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 MLLT10P55197 1068 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 EEF1DP3Q658K8 133 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 BRSK2Q8IWQ3 736 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 SHCBP1Q8NEM2 672 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 NAT9Q9BTE0 207 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 C9orf16Q9BUW7 83 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 SMARCAD1Q9H4L7 1026 aa18.25■□□□□ 0.51
PKP3-201ENST00000331563 CENPBD1B2RD01 187 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 GPC4O75487 556 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 PRKCBP05771 671 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 MLNP12872 115 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 INSRRP14616 1297 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 FASP25445 335 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 ACADSBP45954 432 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 TMBIM6P55061 237 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 ZNF846Q147U1 533 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 MAPRE2Q15555 327 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 TAPT1Q6NXT6 567 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 DPP9Q86TI2 863 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 PACRGLQ8N7B6 248 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 Q8N9G6 341 aaPredicted RBP18.24■□□□□ 0.51
PKP3-201ENST00000331563 HTR3CQ8WXA8 447 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 HEXIM2Q96MH2 286 aaKnown RBP18.24■□□□□ 0.51
PKP3-201ENST00000331563 SNX25Q9H3E2 840 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 ADAM28Q9UKQ2 775 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 PSME2Q9UL46 239 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 EI24O14681 340 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 ARSAP15289 507 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 LRPAP1P30533 357 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 HPCAL1P37235 193 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 RGS7P49802 495 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 HK2P52789 917 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 C6orf10Q5SRN2 563 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 SPPL2CQ8IUH8 684 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 EPHX4Q8IUS5 362 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 GRAMD2AQ8IUY3 354 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 MAGEE2Q8TD90 523 aaPredicted RBP18.24■□□□□ 0.51
PKP3-201ENST00000331563 ZNF347Q96SE7 839 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 LGMNQ99538 433 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 HMG20AQ9NP66 347 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 EGFL7Q9UHF1 273 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 PCDHGA11Q9Y5H2 935 aa18.24■□□□□ 0.51
PKP3-201ENST00000331563 PHGDHO43175 533 aaKnown RBP18.23■□□□□ 0.51
PKP3-201ENST00000331563 ATP6V1B2P21281 511 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 AVPR1AP37288 418 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 ARHGAP1Q07960 439 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 OLIG2Q13516 323 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms