RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 SCUBE2Q9NQ36 999 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 SEPT10Q9P0V9 454 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 RIMKLBQ9ULI2 386 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 LOC285095A0A1B0GVY8 99 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 TSPAN11A1L157 253 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 FAM47DPA6NHR8 397 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 CHURC1-FNTBB4DL54 471 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 SCAMP3O14828 347 aaKnown RBP9.58□□□□□ -0.88
C11orf54-201ENST00000331239 HTRA2O43464 458 aaPredicted RBP9.58□□□□□ -0.88
C11orf54-201ENST00000331239 SNAP91O60641 907 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 ZSCAN5DPP0CG00 497 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 NFKB1P19838 968 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 ADRA1AP35348 466 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 FRG1Q14331 258 aaKnown RBP9.58□□□□□ -0.88
C11orf54-201ENST00000331239 DLG2Q15700 870 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 MYLK3Q32MK0 819 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 TMEM215Q68D42 235 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 ZNF449Q6P9G9 518 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 KDELC1Q6UW63 502 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 GBP7Q8N8V2 638 aaPredicted RBP9.58□□□□□ -0.88
C11orf54-201ENST00000331239 CCDC63Q8NA47 563 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 CPT1BQ92523 772 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 CHFRQ96EP1 664 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 MAGEB18Q96M61 343 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 GABRG3Q99928 467 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 ADGRE3Q9BY15 652 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 ATP13A3Q9H7F0 1226 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 SCML1Q9UN30 329 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 PPIL1Q9Y3C6 166 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 MYO10Q9HD67 2058 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 CFAP73A6NFT4 308 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 E7ESA3 106 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 ATG13O75143 517 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 PRNPP04156 253 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 FGF1P05230 155 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 MAGEA3P43357 314 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 ARL4CP56559 192 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 POLR2LP62875 67 aaKnown RBP9.57□□□□□ -0.88
C11orf54-201ENST00000331239 RANBP10Q6VN20 620 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 NLRP9Q7RTR0 991 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 TDRPQ86YL5 185 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 NAT16Q8N8M0 369 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 PRCCQ92733 491 aaPredicted RBP9.57□□□□□ -0.88
C11orf54-201ENST00000331239 MYO19Q96H55 970 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 AGAP3Q96P47 875 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 RANBP9Q96S59 729 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 MRM3Q9HC36 420 aaKnown RBP9.57□□□□□ -0.88
C11orf54-201ENST00000331239 CD248Q9HCU0 757 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 HACD3Q9P035 362 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 ARL2BPQ9Y2Y0 163 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.57□□□□□ -0.88
C11orf54-201ENST00000331239 XIRP2A4UGR9 3374 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 TTC36A6NLP5 189 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 PRRT4C9JH25 899 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 ZNF821O75541 412 aaPredicted RBP9.57□□□□□ -0.88
C11orf54-201ENST00000331239 UBOX5O94941 541 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 METTL18O95568 372 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 ETS1P14921 441 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 SERPINA4P29622 427 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 KIR2DL1P43626 348 aaPredicted RBP9.57□□□□□ -0.88
C11orf54-201ENST00000331239 ZBTB16Q05516 673 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 ELAVL3Q14576 367 aaKnown RBP9.57□□□□□ -0.88
C11orf54-201ENST00000331239 FASTKD3Q14CZ7 662 aaKnown RBP9.57□□□□□ -0.88
C11orf54-201ENST00000331239 EOGTQ5NDL2 527 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 BRAT1Q6PJG6 821 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 CYS1Q717R9 158 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 CENPUQ71F23 418 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 PRPF39Q86UA1 669 aaKnown RBP9.57□□□□□ -0.88
C11orf54-201ENST00000331239 TRABD2AQ86V40 505 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 PDIK1LQ8N165 341 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 PGBD5Q8N414 524 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 FAM3CQ92520 227 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 SEMA3CQ99985 751 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 HEPHQ9BQS7 1158 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 TRABDQ9H4I3 376 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 CASS4Q9NQ75 786 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 MYO18AQ92614 2054 aaKnown RBP9.57□□□□□ -0.88
C11orf54-201ENST00000331239 CKAP5Q14008 2032 aa9.57□□□□□ -0.88
C11orf54-201ENST00000331239 K7EQS6 105 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 MGRN1O60291 552 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 SPAG6O75602 509 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 MAP3K6O95382 1288 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 NDST3O95803 873 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 MMP2P08253 660 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 GLDCP23378 1020 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 PSMA3P25788 255 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 PSMB4P28070 264 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 ELF3P78545 371 aaPredicted RBP9.56□□□□□ -0.88
C11orf54-201ENST00000331239 PDE1BQ01064 536 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 IL9RQ01113 521 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 CDH17Q12864 832 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 CAMK2GQ13555 558 aaPredicted RBP9.56□□□□□ -0.88
C11orf54-201ENST00000331239 FAM46CQ5VWP2 391 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 SCG3Q8WXD2 468 aaKnown RBP9.56□□□□□ -0.88
C11orf54-201ENST00000331239 OR8D1Q8WZ84 308 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 BHMTQ93088 406 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 ECHDC3Q96DC8 303 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 TBL1YQ9BQ87 522 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 CIPCQ9C0C6 399 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 VPS37BQ9H9H4 285 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms