RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 VPS37BQ9H9H4 285 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 PLAC1Q9HBJ0 212 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 FAM237BA0A1B0GVD1 139 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 HEATR9A2RTY3 570 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 ANKRD66B4E2M5 251 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 MAP2K7O14733 419 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 LEFTY1O75610 366 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 PRNPP04156 253 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 UGT2B4P06133 528 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 EPHX1P07099 455 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 PHBP35232 272 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 EPHB1P54762 984 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 CHPFQ8IZ52 775 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 STK40Q8N2I9 435 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 PIH1D2Q8WWB5 315 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 A0A087WUV0 522 aaPredicted RBP10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 ATP8B1O43520 1251 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 USP1O94782 785 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 POLBP06746 335 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 TIE1P35590 1138 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 MRPS21P82921 87 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 PRKCQQ04759 706 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 LAMB3Q13751 1172 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 SEPT6Q14141 434 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 SLC29A2Q14542 456 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 CRYMQ14894 314 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 FBXO43Q4G163 708 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 ARSIQ5FYB1 569 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 SPANXN3Q5MJ09 141 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 PKN3Q6P5Z2 889 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 BRAT1Q6PJG6 821 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 TRMT11Q7Z4G4 463 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 TMEM135Q86UB9 458 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 ZSWIM9Q86XI8 627 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 TMIEQ8NEW7 156 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 GSDMBQ8TAX9 411 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 HCAR2Q8TDS4 363 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 KLHL32Q96NJ5 620 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 GABRG3Q99928 467 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 TRIM56Q9BRZ2 755 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 ZDHHC4Q9NPG8 344 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 PRSS16Q9NQE7 514 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 HACD3Q9P035 362 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 DKK3Q9UBP4 350 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 PHTF1Q9UMS5 762 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 PLAAQ9Y263 795 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 SASH3O75995 380 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 SSTR1P30872 391 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 NTSR1P30989 418 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 STX2P32856 288 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 CAMK2GQ13555 558 aaPredicted RBP10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 CCINQ13939 588 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 FRG1Q14331 258 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 ZNF805Q5CZA5 627 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 ALS2CLQ60I27 953 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 LRIG3Q6UXM1 1119 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 CAPN12Q6ZSI9 719 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 C3orf62Q6ZUJ4 267 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 NLRP9Q7RTR0 991 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 DSG4Q86SJ6 1040 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 IQCKQ8N0W5 287 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 PAF1Q8N7H5 531 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 BLOC1S5Q8TDH9 187 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 ATXN2LQ8WWM7 1075 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 SRPK1Q96SB4 655 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 FAM129BQ96TA1 746 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 ARHGEF3Q9NR81 526 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 PPIL1Q9Y3C6 166 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 SPO11Q9Y5K1 396 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 RPS6KL1Q9Y6S9 549 aa10.3□□□□□ -0.76
VIPAS39-201ENST00000327028 UNC80Q8N2C7 3258 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 A0A0J9YYE9 177 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 MROH6A6NGR9 719 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 CAPN8A6NHC0 703 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 PAPSS2O95340 614 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 TRBC1P01850 177 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 PRKCGP05129 697 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 PIRTP0C851 137 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 BMP1P13497 986 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 SLC8A1P32418 973 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 WASP42768 502 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 ANKRD20A4Q4UJ75 823 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 SDE2Q6IQ49 451 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 ZNF852Q6ZMS4 543 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 NDUFAF2Q8N183 169 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 IL17RCQ8NAC3 791 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 BRSK1Q8TDC3 778 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 PEX13Q92968 403 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 ZNF669Q96BR6 464 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 MCCC1Q96RQ3 725 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 TRABDQ9H4I3 376 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 FBRSQ9HAH7 460 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 CHRAC1Q9NRG0 131 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 WNT16Q9UBV4 365 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 RIMKLBQ9ULI2 386 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 PPM1HQ9ULR3 514 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 CA14Q9ULX7 337 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 ZNF711Q9Y462 761 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 NFS1Q9Y697 457 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms