RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 NELL2Q99435 816 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 TDRD1Q9BXT4 1180 aaKnown RBP18.17■□□□□ 0.5
SYNE4-201ENST00000324444 GTSE1Q9NYZ3 720 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 SLC24A2Q9UI40 661 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 SOX13Q9UN79 622 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 RAI2Q9Y5P3 530 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 NFS1Q9Y697 457 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 EXOC1LA0A1B0GW35 172 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 SHISA7A6NL88 538 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 GOLGA8KD6RF30 607 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 RASGRF2O14827 1237 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 APODP05090 189 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 PDE1BQ01064 536 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 NAB1Q13506 487 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 RASA2Q15283 850 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 DLG2Q15700 870 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 GEN1Q17RS7 908 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 HP1BP3Q5SSJ5 553 aaPredicted RBP18.17■□□□□ 0.5
SYNE4-201ENST00000324444 CEP85LQ5SZL2 805 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 STEAP4Q687X5 459 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 DENND5AQ6IQ26 1287 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 ASCL5Q7RTU5 278 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 PHTF2Q8N3S3 785 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 SPOCK2Q92563 424 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 CFAP36Q96G28 342 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 RPL10LQ96L21 214 aaKnown RBP18.17■□□□□ 0.5
SYNE4-201ENST00000324444 ZNF641Q96N77 438 aaPredicted RBP18.17■□□□□ 0.5
SYNE4-201ENST00000324444 KIFC1Q9BW19 673 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 ACSS3Q9H6R3 686 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 C8orf33Q9H7E9 229 aaPredicted RBP18.17■□□□□ 0.5
SYNE4-201ENST00000324444 SPATA6Q9NWH7 488 aaPredicted RBP18.17■□□□□ 0.5
SYNE4-201ENST00000324444 HACD3Q9P035 362 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 ACTL7AQ9Y615 435 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 IKBKGQ9Y6K9 419 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 PIAS3Q9Y6X2 628 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 MUC22E2RYF6 1773 aaPredicted RBP18.16■□□□□ 0.5
SYNE4-201ENST00000324444 TBC1D3BA6NDS4 549 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 SMAD6O43541 496 aaKnown RBP18.16■□□□□ 0.5
SYNE4-201ENST00000324444 PAPSS2O95340 614 aaPredicted RBP18.16■□□□□ 0.5
SYNE4-201ENST00000324444 CRTAMO95727 393 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 SSTR1P30872 391 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 OPRD1P41143 372 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 RGRP47804 291 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 ILF2Q12905 390 aaKnown RBP18.16■□□□□ 0.5
SYNE4-201ENST00000324444 MYLK3Q32MK0 819 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 KRT71Q3SY84 523 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 FAM182AQ5T1J6 154 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 ARMC12Q5T9G4 340 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 PKN3Q6P5Z2 889 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 TMEM135Q86UB9 458 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 RYBPQ8N488 228 aaPredicted RBP18.16■□□□□ 0.5
SYNE4-201ENST00000324444 PAF1Q8N7H5 531 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 RMDN1Q96DB5 314 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 EXOC2Q96KP1 924 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 APOL2Q9BQE5 337 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 TM6SF2Q9BZW4 377 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 SYBUQ9NX95 663 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 RIMKLBQ9ULI2 386 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 NDRG2Q9UN36 371 aaKnown RBP18.16■□□□□ 0.5
SYNE4-201ENST00000324444 RPS6KL1Q9Y6S9 549 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 CFAP54Q96N23 3096 aa18.16■□□□□ 0.5
SYNE4-201ENST00000324444 FAM186AA6NE01 2351 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 WDR87Q6ZQQ6 2873 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 PRR23AA6NEV1 266 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 WASH3PC4AMC7 463 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 K7ERQ8 282 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 CDH16O75309 829 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 BANF1O75531 89 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 SP9P0CG40 484 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 CTSOP43234 321 aaPredicted RBP18.15■□□□□ 0.5
SYNE4-201ENST00000324444 GRIA4P48058 902 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 EPHB1P54762 984 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 GPX6P59796 221 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 POLR2LP62875 67 aaKnown RBP18.15■□□□□ 0.5
SYNE4-201ENST00000324444 ZNF844Q08AG5 666 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 SIRPB2Q5JXA9 342 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 DGKKQ5KSL6 1271 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 LGSNQ5TDP6 509 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 UNC5AQ6ZN44 842 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 TDRPQ86YL5 185 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 SLC25A41Q8N5S1 370 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.15■□□□□ 0.5
SYNE4-201ENST00000324444 BRSK1Q8TDC3 778 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 HCAR2Q8TDS4 363 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 TRIB3Q96RU7 358 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 SH3GL2Q99962 352 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 OSBPL1AQ9BXW6 950 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 TRABDQ9H4I3 376 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 NSMCE4AQ9NXX6 385 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 SUN2Q9UH99 717 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 TCAF1Q9Y4C2 921 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 FAM169AQ9Y6X4 670 aa18.15■□□□□ 0.5
SYNE4-201ENST00000324444 TCRBV9S1A1TA0A576 114 aa18.14■□□□□ 0.49
SYNE4-201ENST00000324444 TRIM24O15164 1050 aa18.14■□□□□ 0.49
SYNE4-201ENST00000324444 ALDH1A2O94788 518 aa18.14■□□□□ 0.49
SYNE4-201ENST00000324444 ATXN1LP0C7T5 689 aaKnown RBP18.14■□□□□ 0.49
SYNE4-201ENST00000324444 PRKCHP24723 683 aa18.14■□□□□ 0.49
SYNE4-201ENST00000324444 TNFRSF4P43489 277 aa18.14■□□□□ 0.49
SYNE4-201ENST00000324444 SLC6A11P48066 632 aa18.14■□□□□ 0.49
SYNE4-201ENST00000324444 NUMBP49757 651 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms