RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 SMYD5Q6GMV2 418 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 IL27RAQ6UWB1 636 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 MILR1Q7Z6M3 343 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.82□□□□□ -0.04
TCOF1-201ENST00000323668 MARCH2Q9P0N8 246 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 SFMBT1Q9UHJ3 866 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 FBXW11Q9UKB1 542 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 YJEFN3A6XGL0 299 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 MLYCDO95822 493 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 GUCA1CO95843 209 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 LINC00032P0C843 101 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 GCAP28676 217 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 DAOAP59103 153 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 MAD2L1Q13257 205 aaPredicted RBP14.81□□□□□ -0.04
TCOF1-201ENST00000323668 SFT2D3Q587I9 215 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 CMPK2Q5EBM0 449 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 EPGNQ6UW88 154 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 ZFAND2BQ8WV99 257 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 HEXDCQ8WVB3 486 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 DACT3Q96B18 629 aaPredicted RBP14.81□□□□□ -0.04
TCOF1-201ENST00000323668 C19orf60Q96EN9 201 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 SLC13A4Q9UKG4 626 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 RAD51BO15315 384 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 KPNA6O60684 536 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 DHRS4L1P0CG22 281 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 RPL9P32969 192 aaKnown RBP14.81□□□□□ -0.04
TCOF1-201ENST00000323668 ZNF460Q14592 562 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 GPR107Q5VW38 600 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 SYPL2Q5VXT5 272 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 SCIMPQ6UWF3 145 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 C8orf59Q8N0T1 100 aaPredicted RBP14.81□□□□□ -0.04
TCOF1-201ENST00000323668 LRTOMTQ8WZ04 291 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 ZFP42Q96MM3 310 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 RHOBTB2Q9BYZ6 727 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 DYTNA2CJ06 578 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 ZBTB48P10074 688 aaPredicted RBP14.81□□□□□ -0.04
TCOF1-201ENST00000323668 FGFR1P11362 822 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 NNMTP40261 264 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 FSCN1Q16658 493 aaKnown RBP14.81□□□□□ -0.04
TCOF1-201ENST00000323668 PPM1LQ5SGD2 360 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 ZNF280DQ6N043 979 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 SZRD1Q7Z422 152 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 FADS3Q9Y5Q0 445 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 ADCY6O43306 1168 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 HS6ST1O60243 411 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 IL1BP01584 269 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 KRT6AP02538 564 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 ALDOAP04075 364 aaKnown RBP14.81□□□□□ -0.04
TCOF1-201ENST00000323668 KRT6BP04259 564 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 PIRTP0C851 137 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 KRT6CP48668 564 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 RPS6KA3P51812 740 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 EPS8Q12929 822 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 GRIK3Q13003 919 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 PRAMEF19Q5SWL8 479 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 DQX1Q8TE96 717 aaKnown RBP14.81□□□□□ -0.04
TCOF1-201ENST00000323668 KLHL5Q96PQ7 755 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 EPS8L2Q9H6S3 715 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 ATP13A1Q9HD20 1204 aa14.81□□□□□ -0.04
TCOF1-201ENST00000323668 DDX28Q9NUL7 540 aaKnown RBP14.81□□□□□ -0.04
TCOF1-201ENST00000323668 LSM7Q9UK45 103 aaKnown RBP14.81□□□□□ -0.04
TCOF1-201ENST00000323668 A6NHS1 94 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 ZNF487B1APH4 448 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 CFAP99D6REC4 459 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 ABL2P42684 1182 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 PTPRNQ16849 979 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 BHMTQ93088 406 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 C1orf50Q9BV19 199 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 COQ10BQ9H8M1 238 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 VRTNQ9H8Y1 702 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 SPTLC1O15269 473 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 CDH18Q13634 790 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 ARHGEF7Q14155 803 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 HERC3Q15034 1050 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 CLEC6AQ6EIG7 209 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 SPPL2CQ8IUH8 684 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 LGI2Q8N0V4 545 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 ZCCHC7Q8N3Z6 543 aaKnown RBP14.8□□□□□ -0.04
TCOF1-201ENST00000323668 ATG16L2Q8NAA4 619 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 RORBQ92753 470 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 LPPQ93052 612 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 MTG1Q9BT17 334 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-201ENST00000323668 NFKBIZQ9BYH8 718 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 ELOVL6Q9H5J4 265 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 MOCS1Q9NZB8 636 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 MYH14Q7Z406 1995 aaKnown RBP14.8□□□□□ -0.04
TCOF1-201ENST00000323668 PPEF2O14830 753 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 PSMD7P51665 324 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 RHOAP61586 193 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 DDX39BQ13838 428 aaKnown RBP14.8□□□□□ -0.04
TCOF1-201ENST00000323668 GPR158Q5T848 1215 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 BROXQ5VW32 411 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 RAP1GAP2Q684P5 730 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 REP15Q6BDI9 236 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 TTC23LQ6PF05 361 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 ADGRG6Q86SQ4 1221 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 KIAA2013Q8IYS2 634 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 NTAN1Q96AB6 310 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 UBA2Q9UBT2 640 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-201ENST00000323668 ZMYM5Q9UJ78 669 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms