RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 FAM220AQ7Z4H9 259 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 SERAC1Q96JX3 654 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 CA5BQ9Y2D0 317 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 TRIP11Q15643 1979 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 FAM149AA5PLN7 773 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 FAM86C2PA6NEL3 165 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 CYP2A6P11509 494 aaPredicted RBP9.78□□□□□ -0.84
COL12A1-201ENST00000322507 TCF7P36402 384 aaPredicted RBP9.78□□□□□ -0.84
COL12A1-201ENST00000322507 SMTNL2Q2TAL5 461 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 GALNTL6Q49A17 601 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 IRAK1BP1Q5VVH5 260 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 FBXO33Q7Z6M2 555 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 ENGASEQ8NFI3 743 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 BAP1Q92560 729 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 LENG9Q96B70 501 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 ZNF471Q9BX82 626 aaPredicted RBP9.78□□□□□ -0.84
COL12A1-201ENST00000322507 KCNF1Q9H3M0 494 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 MAFFQ9ULX9 164 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 GTF2A1LQ9UNN4 478 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 IQSEC2Q5JU85 1478 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 DCCP43146 1447 aa9.78□□□□□ -0.84
COL12A1-201ENST00000322507 M0QYT0 321 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 SERPINB5P36952 375 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 CD151P48509 253 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 FCGRTP55899 365 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 HTRA4P83105 476 aaPredicted RBP9.77□□□□□ -0.84
COL12A1-201ENST00000322507 SPOCK1Q08629 439 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 ZNF662Q6ZS27 426 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 ACBD4Q8NC06 268 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 MCOLN3Q8TDD5 553 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 ZDHHC15Q96MV8 337 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 MUC13Q9H3R2 512 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 SNX8Q9Y5X2 465 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 LOXHD1Q8IVV2 1947 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 ADAM10O14672 748 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 RGS14O43566 566 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 HTR2AP28223 471 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 CACNB3P54284 484 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 CORO2AQ92828 525 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 TOR4AQ9NXH8 423 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 ADAM28Q9UKQ2 775 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 AP4E1Q9UPM8 1137 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 DHRS7Q9Y394 339 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 KCNE2Q9Y6J6 123 aa9.77□□□□□ -0.84
COL12A1-201ENST00000322507 THP07101 528 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 DCKP27707 260 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 ZPBP2Q6X784 338 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 FAM83AQ86UY5 434 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 CREB3L1Q96BA8 519 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 TMEM176AQ96HP8 235 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 KIDINS220Q9ULH0 1771 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 RP2O75695 350 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 ATE1O95260 518 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 MZF1P28698 734 aaPredicted RBP9.77□□□□□ -0.85
COL12A1-201ENST00000322507 CCR3P51677 355 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 RNF151Q2KHN1 245 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 SLC5A9Q2M3M2 681 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 DHFR2Q86XF0 187 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.77□□□□□ -0.85
COL12A1-201ENST00000322507 CCDC3Q9BQI4 270 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 PRDM8Q9NQV8 689 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 RDH8Q9NYR8 311 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 RAB26Q9ULW5 256 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 NPPAP01160 153 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 MKL1Q969V6 931 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 NMRK2Q9NPI5 230 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 CD93Q9NPY3 652 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 ARHGEF4Q9NR80 690 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 GJB4Q9NTQ9 266 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 SH3BGRL2Q9UJC5 107 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 SSR3Q9UNL2 185 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 ZSCAN5BA6NJL1 495 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 ALADP13716 330 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 AQP5P55064 265 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 OGFRL1Q5TC84 451 aaPredicted RBP9.77□□□□□ -0.85
COL12A1-201ENST00000322507 R3HCC1LQ7Z5L2 792 aaKnown RBP9.77□□□□□ -0.85
COL12A1-201ENST00000322507 C4orf19Q8IY42 314 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 MCFD2Q8NI22 146 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 ITCHQ96J02 903 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 DNAJB4Q9UDY4 337 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 PRAMEF22A3QJZ6 481 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 PVALBP20472 110 aaPredicted RBP9.77□□□□□ -0.85
COL12A1-201ENST00000322507 NOS3P29474 1203 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 ARCN1P48444 511 aaKnown RBP9.77□□□□□ -0.85
COL12A1-201ENST00000322507 TPTEP56180 551 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 TMEM86AQ8N2M4 240 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 ELOVL4Q9GZR5 314 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 THAP2Q9H0W7 228 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 FAM49BQ9NUQ9 324 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 NDUFAF1Q9Y375 327 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 HSPB11Q9Y547 144 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 POLRMTO00411 1230 aaKnown RBP9.77□□□□□ -0.85
COL12A1-201ENST00000322507 KCNMA1Q12791 1236 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 SLC25A25Q6KCM7 469 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 SAMD14Q8IZD0 417 aaPredicted RBP9.77□□□□□ -0.85
COL12A1-201ENST00000322507 KLHL5Q96PQ7 755 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 CDC42EP4Q9H3Q1 356 aaKnown RBP9.77□□□□□ -0.85
COL12A1-201ENST00000322507 SYNDIG1LA6NDD5 238 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 CHADO15335 359 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 RAB7AP51149 207 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms