RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 JUNP05412 331 aaKnown RBP22.48■■□□□ 1.19
PNKP-201ENST00000322344 CCDC166P0CW27 439 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 COL6A1P12109 1028 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 MAPKAPK2P49137 400 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 PRAMEP78395 509 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 RING1Q06587 406 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 POLD3Q15054 466 aaPredicted RBP22.48■■□□□ 1.19
PNKP-201ENST00000322344 SIRPB2Q5JXA9 342 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 ZNF280DQ6N043 979 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 RCN3Q96D15 328 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 UXTQ9UBK9 157 aaPredicted RBP22.48■■□□□ 1.19
PNKP-201ENST00000322344 COPG1Q9Y678 874 aaKnown RBP22.48■■□□□ 1.19
PNKP-201ENST00000322344 PEX1O43933 1283 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 PENKP01210 267 aaPredicted RBP22.48■■□□□ 1.19
PNKP-201ENST00000322344 IGLV3-27P01718 113 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 RAG1P15918 1043 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 HOXB8P17481 243 aaPredicted RBP22.48■■□□□ 1.19
PNKP-201ENST00000322344 PBX3P40426 434 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 ACLYP53396 1101 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 SERINC3Q13530 473 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 MRPL58Q14197 206 aaKnown RBP22.48■■□□□ 1.19
PNKP-201ENST00000322344 BTG3Q14201 252 aaPredicted RBP22.48■■□□□ 1.19
PNKP-201ENST00000322344 TMEM198Q66K66 360 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 FAM45BPQ6NSW5 357 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 TRAF7Q6Q0C0 670 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 RNF111Q6ZNA4 994 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 OR6P1Q8NGX9 317 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 FAM45AQ8TCE6 357 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 TRMOQ9BU70 441 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 UNKQ9C0B0 810 aaKnown RBP22.48■■□□□ 1.19
PNKP-201ENST00000322344 ADAMTS6Q9UKP5 1117 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 WISP3O95389 354 aaPredicted RBP22.47■■□□□ 1.19
PNKP-201ENST00000322344 ATXN1LP0C7T5 689 aaKnown RBP22.47■■□□□ 1.19
PNKP-201ENST00000322344 HSPA1AP0DMV8 641 aaKnown RBP22.47■■□□□ 1.19
PNKP-201ENST00000322344 HSPA1BP0DMV9 641 aaKnown RBP22.47■■□□□ 1.19
PNKP-201ENST00000322344 RPL26P61254 145 aaKnown RBP22.47■■□□□ 1.19
PNKP-201ENST00000322344 SULT2A1Q06520 285 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 ART3Q13508 389 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 C10orf120Q5SQS8 335 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 PTAR1Q7Z6K3 402 aaPredicted RBP22.47■■□□□ 1.19
PNKP-201ENST00000322344 SDCCAG8Q86SQ7 713 aaPredicted RBP22.47■■□□□ 1.19
PNKP-201ENST00000322344 EFCAB3Q8N7B9 438 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 GDPD5Q8WTR4 605 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 HDAC10Q969S8 669 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 FEM1CQ96JP0 617 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 RPRD1AQ96P16 312 aaPredicted RBP22.47■■□□□ 1.19
PNKP-201ENST00000322344 C6orf203Q9P0P8 240 aaPredicted RBP22.47■■□□□ 1.19
PNKP-201ENST00000322344 PDP2Q9P2J9 529 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 SKAP2O75563 359 aaPredicted RBP22.47■■□□□ 1.19
PNKP-201ENST00000322344 S1PR4O95977 384 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 HLA-DPA1P20036 260 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 ACVR1Q04771 509 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 PIGGQ5H8A4 983 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 MIB1Q86YT6 1006 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 RNF135Q8IUD6 432 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 PELI3Q8N2H9 469 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 ATAD1Q8NBU5 361 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 HIPK4Q8NE63 616 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 CDRT15Q96T59 188 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 POLR1EQ9GZS1 481 aaKnown RBP22.47■■□□□ 1.19
PNKP-201ENST00000322344 NMRK2Q9NPI5 230 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 PSMD13Q9UNM6 376 aa22.47■■□□□ 1.19
PNKP-201ENST00000322344 SLC12A8A0AV02 714 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 NEMP2A6NFY4 417 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 TMEM233B4DJY2 109 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 H3BNX3 289 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 EPOP01588 193 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 FGF1P05230 155 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 KPNA1P52294 538 aaPredicted RBP22.46■■□□□ 1.19
PNKP-201ENST00000322344 MBTPS1Q14703 1052 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 MAPRE2Q15555 327 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 ZNF423Q2M1K9 1284 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 OR52E8Q6IFG1 317 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 ZFP1Q6P2D0 407 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 CHSY3Q70JA7 882 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 PGBD5Q8N414 524 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 SPPL2BQ8TCT7 592 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 SPATA17Q96L03 361 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 WDR41Q9HAD4 459 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 MEAF6Q9HAF1 191 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 SPATS2LQ9NUQ6 558 aaKnown RBP22.46■■□□□ 1.19
PNKP-201ENST00000322344 TMEM161AQ9NX61 479 aa22.46■■□□□ 1.19
PNKP-201ENST00000322344 UTP6Q9NYH9 597 aaKnown RBP22.46■■□□□ 1.19
PNKP-201ENST00000322344 LDB2O43679 373 aa22.45■■□□□ 1.18
PNKP-201ENST00000322344 TBX18O95935 607 aa22.45■■□□□ 1.18
PNKP-201ENST00000322344 HNRNPLP14866 589 aaKnown RBP eCLIP22.45■■□□□ 1.18
PNKP-201ENST00000322344 TAF10Q12962 218 aa22.45■■□□□ 1.18
PNKP-201ENST00000322344 IHHQ14623 411 aa22.45■■□□□ 1.18
PNKP-201ENST00000322344 IFT43Q96FT9 208 aa22.45■■□□□ 1.18
PNKP-201ENST00000322344 ZNF599Q96NL3 588 aa22.45■■□□□ 1.18
PNKP-201ENST00000322344 TRPC7Q9HCX4 862 aa22.45■■□□□ 1.18
PNKP-201ENST00000322344 TMEM88BA6NKF7 163 aa22.45■■□□□ 1.18
PNKP-201ENST00000322344 PRAMEF11O60813 436 aa22.45■■□□□ 1.18
PNKP-201ENST00000322344 CD1EP15812 388 aa22.45■■□□□ 1.18
PNKP-201ENST00000322344 IMPDH1P20839 514 aa22.45■■□□□ 1.18
PNKP-201ENST00000322344 INHBCP55103 352 aa22.45■■□□□ 1.18
PNKP-201ENST00000322344 SMARCB1Q12824 385 aa22.45■■□□□ 1.18
PNKP-201ENST00000322344 FAM171A1Q5VUB5 890 aa22.45■■□□□ 1.18
PNKP-201ENST00000322344 CUZD1Q86UP6 607 aa22.45■■□□□ 1.18
PNKP-201ENST00000322344 TTC9BQ8N6N2 239 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms