RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 KIF19Q2TAC6 998 aa18.85■□□□□ 0.61
CIRBP-201ENST00000320936 AADACL2Q6P093 401 aa18.85■□□□□ 0.61
CIRBP-201ENST00000320936 IL27RAQ6UWB1 636 aa18.85■□□□□ 0.61
CIRBP-201ENST00000320936 BBS12Q6ZW61 710 aa18.85■□□□□ 0.61
CIRBP-201ENST00000320936 ZSCAN30Q86W11 494 aa18.85■□□□□ 0.61
CIRBP-201ENST00000320936 ZSWIM9Q86XI8 627 aa18.85■□□□□ 0.61
CIRBP-201ENST00000320936 AGAP3Q96P47 875 aa18.85■□□□□ 0.61
CIRBP-201ENST00000320936 PCDHB9Q9Y5E1 797 aa18.85■□□□□ 0.61
CIRBP-201ENST00000320936 RAI2Q9Y5P3 530 aa18.85■□□□□ 0.61
CIRBP-201ENST00000320936 SNX11Q9Y5W9 270 aa18.85■□□□□ 0.61
CIRBP-201ENST00000320936 LRRK1Q38SD2 2015 aa18.85■□□□□ 0.61
CIRBP-201ENST00000320936 C10orf142B7Z368 130 aa18.84■□□□□ 0.61
CIRBP-201ENST00000320936 H7C0C1 242 aa18.84■□□□□ 0.61
CIRBP-201ENST00000320936 TJP3O95049 919 aa18.84■□□□□ 0.61
CIRBP-201ENST00000320936 PYGMP11217 842 aa18.84■□□□□ 0.61
CIRBP-201ENST00000320936 CA4P22748 312 aa18.84■□□□□ 0.61
CIRBP-201ENST00000320936 NFKBIAP25963 317 aa18.84■□□□□ 0.61
CIRBP-201ENST00000320936 ATP5OP48047 213 aa18.84■□□□□ 0.61
CIRBP-201ENST00000320936 TRAF2Q12933 501 aa18.84■□□□□ 0.61
CIRBP-201ENST00000320936 PRKD1Q15139 912 aaPredicted RBP18.84■□□□□ 0.61
CIRBP-201ENST00000320936 ARMC12Q5T9G4 340 aa18.84■□□□□ 0.61
CIRBP-201ENST00000320936 ECHDC3Q96DC8 303 aa18.84■□□□□ 0.61
CIRBP-201ENST00000320936 NSMCE3Q96MG7 304 aa18.84■□□□□ 0.61
CIRBP-201ENST00000320936 GAREM1Q9H706 876 aa18.84■□□□□ 0.61
CIRBP-201ENST00000320936 A0A1W2PQ67 120 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 A8MX80 341 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 APOC4-APOC2K7ER74 178 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 TRAFD1O14545 582 aaPredicted RBP18.83■□□□□ 0.61
CIRBP-201ENST00000320936 CDX4O14627 284 aaPredicted RBP18.83■□□□□ 0.61
CIRBP-201ENST00000320936 RIOK3O14730 519 aaKnown RBP18.83■□□□□ 0.61
CIRBP-201ENST00000320936 SLC30A4O14863 429 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 VILLO15195 856 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 TM7SF2O76062 418 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 PAK4O96013 591 aaPredicted RBP18.83■□□□□ 0.61
CIRBP-201ENST00000320936 APOC2P02655 101 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 CES1P23141 567 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 PTPN7P35236 360 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 MMP12P39900 470 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 EPHB1P54762 984 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 BNC1Q01954 994 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 HLA-BQ31612 363 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 FAM182AQ5T1J6 154 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 PTAR1Q7Z6K3 402 aaPredicted RBP18.83■□□□□ 0.61
CIRBP-201ENST00000320936 QKIQ96PU8 341 aaKnown RBP eCLIP18.83■□□□□ 0.61
CIRBP-201ENST00000320936 IL12RB2Q99665 862 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 C1QTNF7Q9BXJ2 289 aa18.83■□□□□ 0.61
CIRBP-201ENST00000320936 GOLGA6L9A6NEM1 432 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 H0Y8X5 98 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 DDX3YO15523 660 aaKnown RBP18.82■□□□□ 0.6
CIRBP-201ENST00000320936 HTRA2O43464 458 aaPredicted RBP18.82■□□□□ 0.6
CIRBP-201ENST00000320936 LZTS3O60299 673 aaPredicted RBP18.82■□□□□ 0.6
CIRBP-201ENST00000320936 WNT1P04628 370 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 ELFN1P0C7U0 828 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 CD86P42081 329 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 LIG3P49916 1009 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 CLDN2P57739 230 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 FGL2Q14314 439 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 PUM1Q14671 1186 aaKnown RBP eCLIP18.82■□□□□ 0.6
CIRBP-201ENST00000320936 TMEM52BQ4KMG9 183 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 MFSD2AQ8NA29 543 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 HES6Q96HZ4 224 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 FERMT1Q9BQL6 677 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 HERPUD2Q9BSE4 406 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 RTKNQ9BST9 563 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 GDF3Q9NR23 364 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 EFR3BQ9Y2G0 817 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 COQ6Q9Y2Z9 468 aa18.82■□□□□ 0.6
CIRBP-201ENST00000320936 A0A1W2PR77 199 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 A6NNZ2 444 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 HACD1B0YJ81 288 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 TLR4O00206 839 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 KCNK3O14649 394 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 FPGTO14772 594 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 MTSS1O43312 755 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 MAGEC1O60732 1142 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 PGLSO95336 258 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 C6P13671 934 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 CTSKP43235 329 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 OTUD4Q01804 1114 aaKnown RBP18.81■□□□□ 0.6
CIRBP-201ENST00000320936 NIPAL4Q0D2K0 466 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 GSE1Q14687 1217 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 SEL1L2Q5TEA6 688 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 ALG1LQ6GMV1 187 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 USP45Q70EL2 814 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 NDUFAF2Q8N183 169 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 TMEM145Q8NBT3 493 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 ACTL9Q8TC94 416 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 KLHDC7BQ96G42 594 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 FAM118BQ9BPY3 351 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 C1QTNF2Q9BXJ5 285 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 IL21RQ9HBE5 538 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 KLHL8Q9P2G9 620 aaPredicted RBP18.81■□□□□ 0.6
CIRBP-201ENST00000320936 B4GALT6Q9UBX8 382 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 PHTF1Q9UMS5 762 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 FNDC3AQ9Y2H6 1198 aaKnown RBP18.81■□□□□ 0.6
CIRBP-201ENST00000320936 KNL1Q8NG31 2342 aa18.81■□□□□ 0.6
CIRBP-201ENST00000320936 DCDC2BA2VCK2 349 aa18.8■□□□□ 0.6
CIRBP-201ENST00000320936 GOLGA8CPA6NN73 597 aa18.8■□□□□ 0.6
CIRBP-201ENST00000320936 RAD51BO15315 384 aa18.8■□□□□ 0.6
CIRBP-201ENST00000320936 THEGLP0DJG4 465 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms