RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 GABRB2P47870 512 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 ANXA8L1Q5VT79 327 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 AFTPHQ6ULP2 937 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 FAM47BQ8NA70 645 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 SLC22A3O75751 556 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 NTRK1P04629 796 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 ITIH1P19827 911 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 FSCN1Q16658 493 aaKnown RBP16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 STXBP5Q5T5C0 1151 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 SPATA20Q8TB22 786 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 PANX1Q96RD7 426 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 TMEM39BQ9GZU3 492 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 GAKO14976 1311 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 NAGLUP54802 743 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 PIK3R6Q5UE93 754 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 UTS2BQ765I0 119 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 SKA1Q96BD8 255 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 PCDH12Q9NPG4 1184 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 EFR3BQ9Y2G0 817 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 GPR75-ASB3A0A0A6YYF3 556 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 KCNK1O00180 336 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 ADAMTSL2Q86TH1 951 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 ZNF248Q8NDW4 579 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 OR4A15Q8NGL6 344 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 TMEM106CQ9BVX2 250 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 MPZL2O60487 215 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 GLRA2P23416 452 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 SREBF2Q12772 1141 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 COL26A1Q96A83 441 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 C11orf24Q96F05 449 aaPredicted RBP16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 BHLHE41Q9C0J9 482 aaPredicted RBP16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 MYOZ2Q9NPC6 264 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 SNCAIPQ9Y6H5 919 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 RBMXL2O75526 392 aaKnown RBP16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 FAM86B2P0C5J1 330 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 YBX3P16989 372 aaKnown RBP eCLIP16.94■□□□□ 0.34e-12■□□□□ 9.3
SMCHD1-201ENST00000320876 CLCN3P51790 818 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 RGS1Q08116 209 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 DEF8Q6ZN54 512 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 ALYREFQ86V81 257 aaKnown RBP16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 OR8H3Q8N146 312 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 TNFAIP8L1Q8WVP5 186 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 MNDAP41218 407 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 MAMLD1Q13495 774 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 AUHQ13825 339 aaKnown RBP16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 IQCF2Q8IXL9 164 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 ART4Q93070 314 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 ZDHHC15Q96MV8 337 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 UPB1Q9UBR1 384 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 NCANO14594 1321 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 AMPD1P23109 780 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 PDHA2P29803 388 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 METTL21EPA6NDL7 271 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 SIGLEC16A6NMB1 481 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 ZNF432O94892 652 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 ADAM17P78536 824 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 SCRN3Q0VDG4 424 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 MTX3Q5HYI7 312 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 ZNF557Q8N988 423 aaPredicted RBP16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 GLT1D1Q96MS3 346 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 TAAR1Q96RJ0 339 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 SYT15Q9BQS2 421 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 LMAN2LQ9H0V9 348 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 ATP13A5Q4VNC0 1218 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 SPG21Q9NZD8 308 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 HGFP14210 728 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 CBX3Q13185 183 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 TXNRD3Q86VQ6 643 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 NAT14Q8WUY8 206 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 UXTQ9UBK9 157 aaPredicted RBP16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 ZNF180Q9UJW8 692 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 COLGALT2Q8IYK4 626 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 PARP8Q8N3A8 854 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 RASSF5Q8WWW0 418 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 PIK3R3Q92569 461 aa16.94■□□□□ 0.3
SMCHD1-201ENST00000320876 SPATA31A3Q5VYP0 1347 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 AVILO75366 819 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 SH3BGRLO75368 114 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 ZNF286BP0CG31 522 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 CD86P42081 329 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 DRG2P55039 364 aaKnown RBP16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 ACTR3P61158 418 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 TRAPPC5Q8IUR0 188 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 BRSK2Q8IWQ3 736 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 NFKB1P19838 968 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 ANGEL2Q5VTE6 544 aaKnown RBP16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 OR8H1Q8NGG4 311 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 RERGQ96A58 199 aaPredicted RBP16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 KCNN2Q9H2S1 579 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 GMIPQ9P107 970 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 FRMD6Q96NE9 622 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 ACE2Q9BYF1 805 aaPredicted RBP16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 INTS7Q9NVH2 962 aaKnown RBP16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 FAM86C2PA6NEL3 165 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 LIASO43766 372 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 USP17L7P0C7H9 530 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 RPL38P63173 70 aaKnown RBP16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 BRINP3Q76B58 766 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 DGKBQ9Y6T7 804 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms