RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 CARM1Q86X55 608 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 SMARCD1Q96GM5 515 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 SLC29A1Q99808 456 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 CROCCQ5TZA2 2017 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 TDRD15B5MCY1 1934 aaKnown RBP19.54■□□□□ 0.72
ZNF554-201ENST00000317243 ATE1O95260 518 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 C2P06681 752 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 ELNP15502 786 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 PRAMEP78395 509 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 ART3Q13508 389 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 ITGA7Q13683 1181 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 NOMO2Q5JPE7 1267 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 SERINC5Q86VE9 423 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 PSTKQ8IV42 348 aaKnown RBP19.54■□□□□ 0.72
ZNF554-201ENST00000317243 SREK1Q8WXA9 508 aaKnown RBP19.54■□□□□ 0.72
ZNF554-201ENST00000317243 LRTOMTQ8WZ04 291 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 NEURL2Q9BR09 285 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 WDR41Q9HAD4 459 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 TRNAU1APQ9NX07 287 aaKnown RBP19.54■□□□□ 0.72
ZNF554-201ENST00000317243 MPP6Q9NZW5 540 aa19.54■□□□□ 0.72
ZNF554-201ENST00000317243 BCAS2O75934 225 aaPredicted RBP19.53■□□□□ 0.72
ZNF554-201ENST00000317243 CAPNS1P04632 268 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 JUNP05412 331 aaKnown RBP19.53■□□□□ 0.72
ZNF554-201ENST00000317243 BCAP31P51572 246 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 MGAT3Q09327 533 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 ZNF362Q5T0B9 420 aaPredicted RBP19.53■□□□□ 0.72
ZNF554-201ENST00000317243 SEL1L3Q68CR1 1132 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 CENPSQ8N2Z9 138 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 SPATA6LQ8N4H0 392 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 URGCPQ8TCY9 931 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 PLEKHA8Q96JA3 519 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 ZNF597Q96LX8 424 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 TASP1Q9H6P5 420 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 SPATA7Q9P0W8 599 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 BCAP29Q9UHQ4 241 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 CDH9Q9ULB4 789 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 TRIM17Q9Y577 477 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 PIGNO95427 931 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 AP2A1O95782 977 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 CYBAP13498 195 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 FLT3LGP49771 235 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 C21orf59P57076 290 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 CD300CQ08708 224 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 METTL21CQ5VZV1 264 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 NANOGP8Q6NSW7 305 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 FIBCD1Q8N539 461 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 NPAS2Q99743 824 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 CIB1Q99828 191 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 SLC39A10Q9ULF5 831 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 TTC24A2A3L6 582 aaPredicted RBP19.53■□□□□ 0.72
ZNF554-201ENST00000317243 HMOX2P30519 316 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 PPARGP37231 505 aaPredicted RBP19.53■□□□□ 0.72
ZNF554-201ENST00000317243 AVPR1AP37288 418 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 GRIA4P48058 902 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 NAGLUP54802 743 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 ZNF460Q14592 562 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 KCNA10Q16322 511 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 ARL13AQ5H913 290 aaPredicted RBP19.53■□□□□ 0.72
ZNF554-201ENST00000317243 ZNF280BQ86YH2 543 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 FAM47BQ8NA70 645 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 DDHD1Q8NEL9 900 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 B3GALT6Q96L58 329 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 GPATCH1Q9BRR8 931 aaKnown RBP19.53■□□□□ 0.72
ZNF554-201ENST00000317243 NAT9Q9BTE0 207 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 TRPV6Q9H1D0 765 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 NMUR1Q9HB89 426 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 IARS2Q9NSE4 1012 aaKnown RBP19.53■□□□□ 0.72
ZNF554-201ENST00000317243 PNPLA3Q9NST1 481 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 NEU3Q9UQ49 428 aa19.53■□□□□ 0.72
ZNF554-201ENST00000317243 MYLKQ15746 1914 aa19.52■□□□□ 0.72
ZNF554-201ENST00000317243 ACOT8O14734 319 aa19.52■□□□□ 0.72
ZNF554-201ENST00000317243 CXCR3P49682 368 aa19.52■□□□□ 0.72
ZNF554-201ENST00000317243 ACADVLP49748 655 aa19.52■□□□□ 0.72
ZNF554-201ENST00000317243 LIMK2P53671 638 aa19.52■□□□□ 0.72
ZNF554-201ENST00000317243 KCTD11Q693B1 232 aa19.52■□□□□ 0.72
ZNF554-201ENST00000317243 SAPCD2Q86UD0 394 aa19.52■□□□□ 0.72
ZNF554-201ENST00000317243 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.52■□□□□ 0.72
ZNF554-201ENST00000317243 DLG3Q92796 817 aa19.52■□□□□ 0.72
ZNF554-201ENST00000317243 CASP10Q92851 521 aa19.52■□□□□ 0.72
ZNF554-201ENST00000317243 SCYL1Q96KG9 808 aa19.52■□□□□ 0.72
ZNF554-201ENST00000317243 OSBPL11Q9BXB4 747 aa19.52■□□□□ 0.72
ZNF554-201ENST00000317243 CLK4Q9HAZ1 481 aaKnown RBP19.52■□□□□ 0.72
ZNF554-201ENST00000317243 OSER1Q9NX31 292 aa19.52■□□□□ 0.72
ZNF554-201ENST00000317243 HDAC3O15379 428 aa19.52■□□□□ 0.71
ZNF554-201ENST00000317243 SOAT2O75908 522 aa19.52■□□□□ 0.71
ZNF554-201ENST00000317243 CD247P20963 164 aa19.52■□□□□ 0.71
ZNF554-201ENST00000317243 TMED10P49755 219 aaKnown RBP19.52■□□□□ 0.71
ZNF554-201ENST00000317243 RPL14P50914 215 aaKnown RBP19.52■□□□□ 0.71
ZNF554-201ENST00000317243 ESRRGP62508 458 aa19.52■□□□□ 0.71
ZNF554-201ENST00000317243 NAB1Q13506 487 aa19.52■□□□□ 0.71
ZNF554-201ENST00000317243 INTS6LQ5JSJ4 861 aaKnown RBP19.52■□□□□ 0.71
ZNF554-201ENST00000317243 C16orf87Q6PH81 154 aa19.52■□□□□ 0.71
ZNF554-201ENST00000317243 RP9Q8TA86 221 aaKnown RBP19.52■□□□□ 0.71
ZNF554-201ENST00000317243 BORCS5Q969J3 196 aa19.52■□□□□ 0.71
ZNF554-201ENST00000317243 NTAN1Q96AB6 310 aa19.52■□□□□ 0.71
ZNF554-201ENST00000317243 EIF2B3Q9NR50 452 aaKnown RBP19.52■□□□□ 0.71
ZNF554-201ENST00000317243 ADA2Q9NZK5 511 aa19.52■□□□□ 0.71
ZNF554-201ENST00000317243 ZDHHC2Q9UIJ5 367 aa19.52■□□□□ 0.71
ZNF554-201ENST00000317243 SNX13Q9Y5W8 968 aa19.52■□□□□ 0.71
ZNF554-201ENST00000317243 J3QRK9 145 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms