RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 MTMR4Q9NYA4 1195 aa8.78□□□□□ -1
USF3-201ENST00000316407 OPTCQ9UBM4 332 aa8.78□□□□□ -1
USF3-201ENST00000316407 TET3O43151 1660 aa8.78□□□□□ -1
USF3-201ENST00000316407 GNAO1P09471 354 aa8.78□□□□□ -1
USF3-201ENST00000316407 TXNL4AP83876 142 aaKnown RBP8.78□□□□□ -1
USF3-201ENST00000316407 CYP24A1Q07973 514 aa8.78□□□□□ -1
USF3-201ENST00000316407 ST3GAL1Q11201 340 aa8.78□□□□□ -1
USF3-201ENST00000316407 NAT16Q8N8M0 369 aa8.78□□□□□ -1
USF3-201ENST00000316407 HAVCR1Q96D42 359 aa8.78□□□□□ -1
USF3-201ENST00000316407 CRELD1Q96HD1 420 aa8.78□□□□□ -1
USF3-201ENST00000316407 ZFP3Q96NJ6 502 aa8.78□□□□□ -1
USF3-201ENST00000316407 OR52E6Q96RD3 313 aa8.78□□□□□ -1
USF3-201ENST00000316407 TIPINQ9BVW5 301 aa8.78□□□□□ -1
USF3-201ENST00000316407 CXorf21Q9HAI6 301 aa8.78□□□□□ -1
USF3-201ENST00000316407 RBM22Q9NW64 420 aaKnown RBP eCLIP8.78□□□□□ -1
USF3-201ENST00000316407 PTTG2Q9NZH5 202 aa8.78□□□□□ -1
USF3-201ENST00000316407 USP20Q9Y2K6 914 aa8.78□□□□□ -1
USF3-201ENST00000316407 MYO3AQ8NEV4 1616 aa8.78□□□□□ -1
USF3-201ENST00000316407 OGTO15294 1046 aa8.78□□□□□ -1
USF3-201ENST00000316407 WFS1O76024 890 aa8.78□□□□□ -1
USF3-201ENST00000316407 ATP5BP06576 529 aaKnown RBP8.78□□□□□ -1
USF3-201ENST00000316407 RPA4Q13156 261 aa8.78□□□□□ -1
USF3-201ENST00000316407 FAAH2Q6GMR7 532 aa8.78□□□□□ -1
USF3-201ENST00000316407 TRMT11Q7Z4G4 463 aaKnown RBP8.78□□□□□ -1
USF3-201ENST00000316407 ETNPPLQ8TBG4 499 aa8.78□□□□□ -1
USF3-201ENST00000316407 GAL3ST1Q99999 423 aa8.78□□□□□ -1
USF3-201ENST00000316407 ACP6Q9NPH0 428 aa8.78□□□□□ -1
USF3-201ENST00000316407 CD4P01730 458 aa8.77□□□□□ -1
USF3-201ENST00000316407 ENPEPQ07075 957 aa8.77□□□□□ -1
USF3-201ENST00000316407 RGS1Q08116 209 aa8.77□□□□□ -1
USF3-201ENST00000316407 MAPKAPK3Q16644 382 aa8.77□□□□□ -1
USF3-201ENST00000316407 FAM196AQ6ZSG2 479 aa8.77□□□□□ -1
USF3-201ENST00000316407 SH3RF1Q7Z6J0 888 aa8.77□□□□□ -1
USF3-201ENST00000316407 RTKNQ9BST9 563 aa8.77□□□□□ -1
USF3-201ENST00000316407 FNDC11Q9BVV2 318 aa8.77□□□□□ -1
USF3-201ENST00000316407 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.77□□□□□ -1
USF3-201ENST00000316407 ANKDD1BA6NHY2 528 aa8.77□□□□□ -1
USF3-201ENST00000316407 J3QRK9 145 aa8.77□□□□□ -1
USF3-201ENST00000316407 ZNF177Q13360 481 aaPredicted RBP8.77□□□□□ -1
USF3-201ENST00000316407 PTF1AQ7RTS3 328 aa8.77□□□□□ -1
USF3-201ENST00000316407 OR6J1Q8NGC5 347 aa8.77□□□□□ -1
USF3-201ENST00000316407 FBXL8Q96CD0 374 aa8.77□□□□□ -1
USF3-201ENST00000316407 F5H5T6 163 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 ITIH1P19827 911 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 GRAPQ13588 217 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 GRAPLQ8TC17 118 aaPredicted RBP8.77□□□□□ -1.01
USF3-201ENST00000316407 PDP1Q9P0J1 537 aaPredicted RBP8.77□□□□□ -1.01
USF3-201ENST00000316407 DRG1Q9Y295 367 aaKnown RBP8.77□□□□□ -1.01
USF3-201ENST00000316407 PCDHA11Q9Y5I1 949 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 NOL4O94818 638 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 S100A12P80511 92 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 MSANTD1Q6ZTZ1 278 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 FOXRED2Q8IWF2 684 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 TNFRSF25Q93038 417 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 PPM1MQ96MI6 270 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 AIFM2Q9BRQ8 373 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 NEK6Q9HC98 313 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 LNPEPQ9UIQ6 1025 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 OR1G1P47890 313 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 DPYSL3Q14195 570 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 SNAPC1Q16533 368 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 ADGRF2Q8IZF7 708 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 OR52K2Q8NGK3 314 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 TAS2R13Q9NYV9 303 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 USP21Q9UK80 565 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 FAM171BQ6P995 826 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 MTSS1LQ765P7 747 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 FEM1CQ96JP0 617 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 NR3C2P08235 984 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 PIK3R6Q5UE93 754 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 MAT2BQ9NZL9 334 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 CPSF4LA6NMK7 179 aaKnown RBP8.77□□□□□ -1.01
USF3-201ENST00000316407 BOLA2-SMG1P6H3BVE0 249 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 BUD23O43709 281 aaKnown RBP8.77□□□□□ -1.01
USF3-201ENST00000316407 FAM155BO75949 473 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 GADD45AP24522 165 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 IGFBP5P24593 272 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 AFF1P51825 1210 aaKnown RBP8.77□□□□□ -1.01
USF3-201ENST00000316407 DCDC1P59894 354 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 KCNT2Q6UVM3 1135 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 LRRC69Q6ZNQ3 347 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 ZNF717Q9BY31 904 aaPredicted RBP8.77□□□□□ -1.01
USF3-201ENST00000316407 NFKBIZQ9BYH8 718 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 RHBGQ9H310 441 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 KCTD5Q9NXV2 234 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 ABT1Q9ULW3 272 aaKnown RBP8.77□□□□□ -1.01
USF3-201ENST00000316407 ORC5O43913 435 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 HIST1H2ABP04908 130 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 TKTP29401 623 aaKnown RBP8.77□□□□□ -1.01
USF3-201ENST00000316407 MAPK9P45984 424 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 XKR3Q5GH77 459 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 RALGPS1Q5JS13 557 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 HIST3H2AQ7L7L0 130 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 ATG9AQ7Z3C6 839 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 HIST1H2ACQ93077 130 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 AASDHPPTQ9NRN7 309 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 SNTG1Q9NSN8 517 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 COQ3Q9NZJ6 369 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 FOSL1P15407 271 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 BCAT1P54687 386 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms