RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SPNS2Q8IVW8 549 aa18.47■□□□□ 0.55
CCDC43-201ENST00000315286 HS6ST3Q8IZP7 471 aa18.47■□□□□ 0.55
CCDC43-201ENST00000315286 FSTL5Q8N475 847 aaPredicted RBP18.47■□□□□ 0.55
CCDC43-201ENST00000315286 GABPB2Q8TAK5 448 aaPredicted RBP18.47■□□□□ 0.55
CCDC43-201ENST00000315286 PPP4R1Q8TF05 950 aa18.47■□□□□ 0.55
CCDC43-201ENST00000315286 DNAJC1Q96KC8 554 aaKnown RBP18.47■□□□□ 0.55
CCDC43-201ENST00000315286 OXSMQ9NWU1 459 aa18.47■□□□□ 0.55
CCDC43-201ENST00000315286 MGRN1O60291 552 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 DNAJB1P25685 340 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 CREMQ03060 361 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 ZYG11AQ6WRX3 759 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 Q6ZNB5 142 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 FIBCD1Q8N539 461 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 KLHL23Q8NBE8 558 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 OR13C4Q8NGS5 318 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 TMA16Q96EY4 203 aaKnown RBP18.46■□□□□ 0.55
CCDC43-201ENST00000315286 OLFM1Q99784 485 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 UNKQ9C0B0 810 aaKnown RBP18.46■□□□□ 0.55
CCDC43-201ENST00000315286 SCUBE2Q9NQ36 999 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 ASB3Q9Y575 518 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 TARM1B6A8C7 271 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 GFRA2O00451 464 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 KLHL2O95198 593 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 CXCL14O95715 111 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 S1PR4O95977 384 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 SLC12A2P55011 1212 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 SLC14A2Q15849 920 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 LRRC8EQ6NSJ5 796 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 PARP9Q8IXQ6 854 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 MAB21L3Q8N8X9 362 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 RDH11Q8TC12 318 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 STYXQ8WUJ0 223 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 INPP5DQ92835 1189 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 MOCOSQ96EN8 888 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 GATA5Q9BWX5 397 aaPredicted RBP18.46■□□□□ 0.55
CCDC43-201ENST00000315286 ARMCX1Q9P291 453 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 MID2Q9UJV3 735 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 DOCK6Q96HP0 2047 aa18.46■□□□□ 0.55
CCDC43-201ENST00000315286 NRG2O14511 850 aaPredicted RBP18.45■□□□□ 0.54
CCDC43-201ENST00000315286 ZMPSTE24O75844 475 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 PRLP01236 227 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 CLCN5P51795 746 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 HTRA4P83105 476 aaPredicted RBP18.45■□□□□ 0.54
CCDC43-201ENST00000315286 LAMB3Q13751 1172 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 LILRA6Q6PI73 481 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 ZNF783Q6ZMS7 281 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 MAVSQ7Z434 540 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 GALNT7Q86SF2 657 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 HJURPQ8NCD3 748 aaPredicted RBP18.45■□□□□ 0.54
CCDC43-201ENST00000315286 PEX13Q92968 403 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 BHMTQ93088 406 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 UTP4Q969X6 686 aaKnown RBP18.45■□□□□ 0.54
CCDC43-201ENST00000315286 RILPQ96NA2 401 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 SIKE1Q9BRV8 207 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 FEM1AQ9BSK4 669 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 LRRC3Q9BY71 257 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 STK38LQ9Y2H1 464 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 SPO11Q9Y5K1 396 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 A0A087X1B8 175 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 CCDC162PA2VCL2 907 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 TMCC1O94876 653 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 LUC7L3O95232 432 aaKnown RBP18.45■□□□□ 0.54
CCDC43-201ENST00000315286 GOT2P00505 430 aaKnown RBP18.45■□□□□ 0.54
CCDC43-201ENST00000315286 LRG1P02750 347 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 PDHA1P08559 390 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 RASSF2P50749 326 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 TMC7Q7Z402 723 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 TMC8Q8IU68 726 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCDC43-201ENST00000315286 WFDC5Q8TCV5 224 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 SREK1Q8WXA9 508 aaKnown RBP18.45■□□□□ 0.54
CCDC43-201ENST00000315286 MRPS31Q92665 395 aaKnown RBP18.45■□□□□ 0.54
CCDC43-201ENST00000315286 RMDN1Q96DB5 314 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 PTCD3Q96EY7 689 aaKnown RBP18.45■□□□□ 0.54
CCDC43-201ENST00000315286 NSL1Q96IY1 281 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 SMIM14Q96QK8 99 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 NUDCD1Q96RS6 583 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 TDRD1Q9BXT4 1180 aaKnown RBP18.45■□□□□ 0.54
CCDC43-201ENST00000315286 ACSS2Q9NR19 701 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.45■□□□□ 0.54
CCDC43-201ENST00000315286 XPR1Q9UBH6 696 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 LNPEPQ9UIQ6 1025 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 SSX2IPQ9Y2D8 614 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 PCDHGC4Q9Y5F7 938 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 OR51B4Q9Y5P0 310 aa18.45■□□□□ 0.54
CCDC43-201ENST00000315286 TRAFD1O14545 582 aaPredicted RBP18.44■□□□□ 0.54
CCDC43-201ENST00000315286 RPP40O75818 363 aaKnown RBP18.44■□□□□ 0.54
CCDC43-201ENST00000315286 GJA1P17302 382 aa18.44■□□□□ 0.54
CCDC43-201ENST00000315286 KRT72Q14CN4 511 aa18.44■□□□□ 0.54
CCDC43-201ENST00000315286 HECTD2Q5U5R9 776 aa18.44■□□□□ 0.54
CCDC43-201ENST00000315286 LMNTD2Q8IXW0 634 aa18.44■□□□□ 0.54
CCDC43-201ENST00000315286 HEXDCQ8WVB3 486 aa18.44■□□□□ 0.54
CCDC43-201ENST00000315286 STK39Q9UEW8 545 aa18.44■□□□□ 0.54
CCDC43-201ENST00000315286 VPS28Q9UK41 221 aa18.44■□□□□ 0.54
CCDC43-201ENST00000315286 ARIH1Q9Y4X5 557 aaPredicted RBP18.44■□□□□ 0.54
CCDC43-201ENST00000315286 TMEM114B3SHH9 223 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 ZNF195O14628 629 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 CD3EAPO15446 510 aaKnown RBP18.43■□□□□ 0.54
CCDC43-201ENST00000315286 CSPG5O95196 566 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 HSPA4LO95757 839 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms