RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 FMO1Q01740 532 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 SLC14A2Q15849 920 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 SKA1Q96BD8 255 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 CHORDC1Q9UHD1 332 aaPredicted RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 RALGAPA1Q6GYQ0 2036 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 SYNDIG1LA6NDD5 238 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 SPATA31C2B4DYI2 1134 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 S100A3P33764 101 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 ALG11Q2TAA5 492 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 OOSP2Q86WS3 158 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 EFHD2Q96C19 240 aaPredicted RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 FAM49BQ9NUQ9 324 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 VPS28Q9UK41 221 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 NHSL1Q5SYE7 1610 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 DFNA5O60443 496 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 DHFRP00374 187 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 ACO1P21399 889 aaKnown RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 CDK9P50750 372 aaKnown RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 RPL19P84098 196 aaKnown RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 GALNT1Q10472 559 aaPredicted RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 MFSD7Q6UXD7 560 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 PEG10Q86TG7 708 aaKnown RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 SNX32Q86XE0 403 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 FNDC5Q8NAU1 212 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 OR52L1Q8NGH7 329 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 METTL2AQ96IZ6 378 aaKnown RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 CAMK1GQ96NX5 476 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 GBA3Q9H227 469 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 C14orf105Q9NVL8 296 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 STUB1Q9UNE7 303 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 KIF26BQ2KJY2 2108 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 DOCK1Q14185 1865 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 CLRN2A0PK11 232 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 ZSCAN9O15535 394 aaPredicted RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 ASMTLO95671 621 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 IGSF6O95976 241 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 CATP04040 527 aaKnown RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 UROSP10746 265 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 CHI3L1P36222 383 aaPredicted RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 CDH4P55283 916 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 PSMC6P62333 389 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 KCTD21Q4G0X4 260 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 CCNYL2Q5T2Q4 361 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 ARHGAP17Q68EM7 881 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 MSANTD1Q6ZTZ1 278 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 CXXC5Q7LFL8 322 aaKnown RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 ARRDC4Q8NCT1 418 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 CDRT15Q96T59 188 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 FAM49AQ9H0Q0 323 aaPredicted RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 DDX60LQ5H9U9 1706 aaKnown RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 MYO1GB0I1T2 1018 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 NR5A2O00482 541 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 RAD17O75943 681 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 VAV1P15498 845 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 SERPINA4P29622 427 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 UBXN2AP68543 259 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 EMC1Q8N766 993 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 RBM15BQ8NDT2 890 aaKnown RBP8.86□□□□□ -0.99
COL6A5-202ENST00000312481 PDCD2LQ9BRP1 358 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 NUDT4Q9NZJ9 180 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 CALML5Q9NZT1 146 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 MAFFQ9ULX9 164 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 INVSQ9Y283 1065 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 RGS5O15539 181 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 ERN1O75460 977 aaKnown RBP8.86□□□□□ -0.99
COL6A5-202ENST00000312481 SLC22A3O75751 556 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 HPRP00739 348 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 FAM153BP0C7A2 387 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 TCF3P15923 654 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 MAPKAPK2P49137 400 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 OSTNP61366 133 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 FAM153CQ494X1 144 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 BAIAP2L2Q6UXY1 529 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 GPRIN3Q6ZVF9 776 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 IL25Q9H293 177 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 ACTR8Q9H981 624 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 ZIM2Q9NZV7 527 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.86□□□□□ -0.99
COL6A5-202ENST00000312481 MAFO75444 373 aaPredicted RBP8.86□□□□□ -0.99
COL6A5-202ENST00000312481 KRT36O76013 467 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 LIMK2P53671 638 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 NOMO1Q15155 1222 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 RUNDC3AQ59EK9 446 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 ZZZ3Q8IYH5 903 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 NAT14Q8WUY8 206 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 ITFG2Q969R8 447 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 TMEM143Q96AN5 459 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 CRELD1Q96HD1 420 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 PDE2AO00408 941 aaPredicted RBP8.86□□□□□ -0.99
COL6A5-202ENST00000312481 ULK1O75385 1050 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 SEC24AO95486 1093 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 GABARAPL2P60520 117 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 VAC14Q08AM6 782 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 BST1Q10588 318 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 TRAF2Q12933 501 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 THEMIS2Q5TEJ8 643 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 RNF135Q8IUD6 432 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 TMEM192Q8IY95 271 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 EXT2Q93063 718 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 TMEM159Q96B96 161 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms