RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 ABCC13Q9NSE7 274 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 KANSL3Q9P2N6 904 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 VPS4AQ9UN37 437 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 TCRBV5S4A2TA0A5A2 114 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 TMEM150BA6NC51 233 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 SAGE2PA6NJ88 616 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 DDX3YO15523 660 aaKnown RBP13.75□□□□□ -0.21
CLCN6-201ENST00000312413 SERPINA4P29622 427 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 KLF10Q13118 480 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 HKDC1Q2TB90 917 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 AFTPHQ6ULP2 937 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 PACS1Q6VY07 963 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 DSG4Q86SJ6 1040 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 ITCHQ96J02 903 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 MTMR9Q96QG7 549 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 NMUR2Q9GZQ4 415 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 SMPD4Q9NXE4 827 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 JCADQ9P266 1359 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 DPPA5A6NC42 116 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 TISP43B9A030 160 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 RFXANKO14593 260 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 UGT2B11O75310 529 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 NR2F1P10589 423 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 CXCR2P25025 360 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 GALNT3Q14435 633 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 GRIK4Q16099 956 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 USP45Q70EL2 814 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 PDPRQ8NCN5 879 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 TEX47Q8TBZ9 253 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 PIH1D2Q8WWB5 315 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 FAIM2Q9BWQ8 316 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 ASB8Q9H765 288 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 PCDH12Q9NPG4 1184 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 KCNQ5Q9NR82 932 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 PFDN2Q9UHV9 154 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 RPTORQ8N122 1335 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 MATN2O00339 956 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 CASKO14936 926 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 SUV39H1O43463 412 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 AVILO75366 819 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 SLC22A3O75751 556 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 TGDSO95455 350 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 LINC00032P0C843 101 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 ATP6V0D1P61421 351 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 FMO1Q01740 532 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 SGCGQ13326 291 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 C1orf186Q6ZWK4 172 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 ADAMTSL2Q86TH1 951 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 UNC93AQ86WB7 457 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 PHF13Q86YI8 300 aaPredicted RBP13.75□□□□□ -0.21
CLCN6-201ENST00000312413 TRPV1Q8NER1 839 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 REPS2Q8NFH8 660 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 ELMO1Q92556 727 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 TRMOQ9BU70 441 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 AKAP7Q9P0M2 348 aaPredicted RBP13.75□□□□□ -0.21
CLCN6-201ENST00000312413 ZNF180Q9UJW8 692 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 LRRC14BA6NHZ5 514 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 ARHGEF33A8MVX0 844 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 CCNB1P14635 433 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 MAGP20916 626 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 PPIL2Q13356 520 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 EML3Q32P44 896 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 PLEKHH3Q7Z736 793 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 RBM15BQ8NDT2 890 aaKnown RBP13.75□□□□□ -0.21
CLCN6-201ENST00000312413 OR2T12Q8NG77 320 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 EZH1Q92800 747 aaPredicted RBP13.75□□□□□ -0.21
CLCN6-201ENST00000312413 OR52E6Q96RD3 313 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 CIB1Q99828 191 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 FNDC11Q9BVV2 318 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 PRDM12Q9H4Q4 367 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 PNPLA8Q9NP80 782 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 IQSEC2Q5JU85 1478 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 STX16-NPEPL1H3BU86 382 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 STX16O14662 325 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 BUD23O43709 281 aaKnown RBP13.74□□□□□ -0.21
CLCN6-201ENST00000312413 FADS2O95864 444 aaKnown RBP13.74□□□□□ -0.21
CLCN6-201ENST00000312413 BMP6P22004 513 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 PTPRNQ16849 979 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 TRIM40Q6P9F5 258 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 RPTNQ6XPR3 784 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 FAM183BPQ6ZVS7 135 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 HPS6Q86YV9 775 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 SHC3Q92529 594 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 YME1L1Q96TA2 773 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 GSDMCQ9BYG8 508 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 FBXO5Q9UKT4 447 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 MRPL42Q9Y6G3 142 aaKnown RBP13.74□□□□□ -0.21
CLCN6-201ENST00000312413 SPATA31A6Q5VVP1 1343 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 MAGEC1O60732 1142 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 ZNF286BP0CG31 522 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 PPIBP23284 216 aaKnown RBP13.74□□□□□ -0.21
CLCN6-201ENST00000312413 MSX2P35548 267 aaPredicted RBP13.74□□□□□ -0.21
CLCN6-201ENST00000312413 HSF2Q03933 536 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 ITPK1Q13572 414 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 TIGD2Q4W5G0 525 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 SETMARQ53H47 684 aaPredicted RBP13.74□□□□□ -0.21
CLCN6-201ENST00000312413 MFSD5Q6N075 450 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 FBXO42Q6P3S6 717 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 RASSF6Q6ZTQ3 369 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 THAP5Q7Z6K1 395 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms