RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 ATP13A1Q9HD20 1204 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 ARHGEF4Q9NR80 690 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 MPP6Q9NZW5 540 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 TRIM10Q9UDY6 481 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 PPP2R2CQ9Y2T4 447 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 SIT1Q9Y3P8 196 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 GRID2IPA4D2P6 1211 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 TBC1D3BA6NDS4 549 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 FGF10O15520 208 aaPredicted RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 KDM1AO60341 852 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 EGFP01133 1207 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 APODP05090 189 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 S100A6P06703 90 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 PCNAP12004 261 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 RHCEP18577 417 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 AOC1P19801 751 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 EPHB2P29323 1055 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 KIR2DL1P43626 348 aaPredicted RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 MAPKAPK2P49137 400 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 ETV1P50549 477 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 CCNHP51946 323 aaPredicted RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 OXCT1P55809 520 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 RHDQ02161 417 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 LMAN2Q12907 356 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 BNIP1Q12981 228 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 ZNF177Q13360 481 aaPredicted RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 CDH18Q13634 790 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 GTF2H3Q13889 308 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 COL9A2Q14055 689 aaPredicted RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 UBXN2BQ14CS0 331 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 EIF4HQ15056 248 aaKnown RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 PDK2Q15119 407 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 GEN1Q17RS7 908 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 TMEM215Q68D42 235 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 CAPRIN2Q6IMN6 1127 aaKnown RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 ZNF783Q6ZMS7 281 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 ADIPOR2Q86V24 386 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 CIR1Q86X95 450 aaPredicted RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 CCDC117Q8IWD4 279 aaPredicted RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 SFTPA1Q8IWL2 248 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 RHOT1Q8IXI2 618 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 CCDC13Q8IYE1 715 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 CCDC105Q8IYK2 499 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 PPM1NQ8N819 430 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 GIMAP5Q96F15 307 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 ALG14Q96F25 216 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 CCDC138Q96M89 665 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 DHRS4Q9BTZ2 278 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 TXLNGYQ9BZA5 131 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 MFSD1Q9H3U5 465 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 GOLPH3Q9H4A6 298 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 CATSPERBQ9H7T0 1116 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.36□□□□□ -1.07
CHD6-201ENST00000309279 INTS10Q9NVR2 710 aaKnown RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 TMEM248Q9NWD8 314 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 GPATCH2LQ9NWQ4 482 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 ACTR10Q9NZ32 417 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 DLGAP2Q9P1A6 1054 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 RCOR3Q9P2K3 495 aaPredicted RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 INTS6Q9UL03 887 aaKnown RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 HCN2Q9UL51 889 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 OR51B4Q9Y5P0 310 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 SNX8Q9Y5X2 465 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 CACNA1IQ9P0X4 2223 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 ILVBLA1L0T0 632 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 MACROD2A1Z1Q3 448 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 PRR33A8MZF0 331 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 ZNF487B1APH4 448 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 EEF2KO00418 725 aaKnown RBP8.35□□□□□ -1.07
CHD6-201ENST00000309279 PSTPIP1O43586 416 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 PI15O43692 258 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 SPOPO43791 374 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 ABCB7O75027 752 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 MOCS3O95396 460 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 FAM153BP0C7A2 387 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 PABPC1P11940 636 aaKnown RBP8.35□□□□□ -1.07
CHD6-201ENST00000309279 GOT1P17174 413 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 ATP5F1P24539 256 aaPredicted RBP8.35□□□□□ -1.07
CHD6-201ENST00000309279 PSMA4P25789 261 aaKnown RBP8.35□□□□□ -1.07
CHD6-201ENST00000309279 OR1E1P30953 314 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 CD70P32970 193 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 CDH6P55285 790 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 TPI1P60174 286 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 KDSRQ06136 332 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 DPYSQ14117 519 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 LRRC32Q14392 662 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 DMC1Q14565 340 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 PPP6R3Q5H9R7 873 aaPredicted RBP8.35□□□□□ -1.07
CHD6-201ENST00000309279 RWDD4Q6NW29 188 aaKnown RBP8.35□□□□□ -1.07
CHD6-201ENST00000309279 RFX8Q6ZV50 586 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 CHST15Q7LFX5 561 aaPredicted RBP8.35□□□□□ -1.07
CHD6-201ENST00000309279 ANKS1BQ7Z6G8 1248 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 TFAP2DQ7Z6R9 452 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 NT5DC3Q86UY8 548 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 MAP7D3Q8IWC1 876 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 SYCE1Q8N0S2 351 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 AHI1Q8N157 1196 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 UMODL1-AS1Q8N2C9 162 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms