RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 ZNF182P17025 639 aaPredicted RBP11.21□□□□□ -0.61
PTPN7-201ENST00000309017 GABRB3P28472 473 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 SLC26A2P50443 739 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 ITKQ08881 620 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 TRIM16LQ309B1 348 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 ZNF829Q3KNS6 432 aaPredicted RBP11.21□□□□□ -0.61
PTPN7-201ENST00000309017 HABP4Q5JVS0 413 aaKnown RBP11.21□□□□□ -0.61
PTPN7-201ENST00000309017 LDLRAP1Q5SW96 308 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 PKN3Q6P5Z2 889 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 MAMDC4Q6UXC1 1216 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 NPWQ8N729 165 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 PNPLA1Q8N8W4 532 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 TUBGCP3Q96CW5 907 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 TBL1YQ9BQ87 522 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 GPATCH1Q9BRR8 931 aaKnown RBP11.21□□□□□ -0.61
PTPN7-201ENST00000309017 ALG9Q9H6U8 611 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 ZFYVE28Q9HCC9 887 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 GIMAP2Q9UG22 337 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 TRIM43BA6NCK2 446 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 CFAP99D6REC4 459 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 H3BMQ9 156 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 K7EPI3 171 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 DCLK1O15075 740 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 ALBP02768 609 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 VARSP26640 1264 aaKnown RBP11.21□□□□□ -0.61
PTPN7-201ENST00000309017 TTKP33981 857 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 TTLL4Q14679 1199 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 CENPSQ8N2Z9 138 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 DNAJB14Q8TBM8 379 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 CCDC126Q96EE4 140 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 ZBED3Q96IU2 234 aaPredicted RBP11.21□□□□□ -0.61
PTPN7-201ENST00000309017 C12orf42Q96LP6 360 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 CCDC138Q96M89 665 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 COG8Q96MW5 612 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 C11orf84Q9BUA3 381 aaPredicted RBP11.21□□□□□ -0.61
PTPN7-201ENST00000309017 BEGAINQ9BUH8 593 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 ULBP1Q9BZM6 244 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 TSPYL2Q9H2G4 693 aaPredicted RBP11.21□□□□□ -0.61
PTPN7-201ENST00000309017 GOLGA2P5Q9HBQ8 144 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 TBC1D13Q9NVG8 400 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 GPRC5DQ9NZD1 345 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 TTC36A6NLP5 189 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 A8MT66 165 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 AP3B1O00203 1094 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 TRIM24O15164 1050 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 MTHFD1P11586 935 aaKnown RBP11.21□□□□□ -0.62
PTPN7-201ENST00000309017 CCNA2P20248 432 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 CDH3P22223 829 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 EIF2B2P49770 351 aaKnown RBP11.21□□□□□ -0.62
PTPN7-201ENST00000309017 EGFLAMQ63HQ2 1017 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 FAM35AQ86V20 835 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 ANKFN1Q8N957 763 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 BPIFB6Q8NFQ5 453 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 SEPT8Q92599 483 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 ABHD8Q96I13 439 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 RPL10LQ96L21 214 aaKnown RBP11.21□□□□□ -0.62
PTPN7-201ENST00000309017 OSBPL2Q9H1P3 480 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 WDCPQ9H6R7 721 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 RPF2Q9H7B2 306 aaKnown RBP11.21□□□□□ -0.62
PTPN7-201ENST00000309017 NDUFAF1Q9Y375 327 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 PCDHGA4Q9Y5G9 962 aa11.21□□□□□ -0.62
PTPN7-201ENST00000309017 A0A087X1B8 175 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 KCNA5P22460 613 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 TKTP29401 623 aaKnown RBP11.2□□□□□ -0.62
PTPN7-201ENST00000309017 RELAQ04206 551 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 RGS21Q2M5E4 152 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 C6orf10Q5SRN2 563 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 RBM20Q5T481 1227 aaKnown RBP11.2□□□□□ -0.62
PTPN7-201ENST00000309017 TSTD2Q5T7W7 516 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 NEPROQ6NW34 567 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 GALNT18Q6P9A2 607 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 NCCRP1Q6ZVX7 275 aaPredicted RBP11.2□□□□□ -0.62
PTPN7-201ENST00000309017 CTU1Q7Z7A3 348 aaKnown RBP11.2□□□□□ -0.62
PTPN7-201ENST00000309017 ATPAF2Q8N5M1 289 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 TMCO5AQ8N6Q1 288 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 PPP1R13LQ8WUF5 828 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 HDAC10Q969S8 669 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 TEKT5Q96M29 485 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 OR12D3Q9UGF7 316 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 AAR2Q9Y312 384 aaKnown RBP11.2□□□□□ -0.62
PTPN7-201ENST00000309017 ONECUT3O60422 494 aaPredicted RBP11.2□□□□□ -0.62
PTPN7-201ENST00000309017 COQ9O75208 318 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 BAIAP3O94812 1187 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 ESRRBO95718 433 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 BMP2P12643 396 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 NCK1P16333 377 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 CHRM3P20309 590 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 NR4A1P22736 598 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 ZNF484Q5JVG2 852 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 C9orf57Q5W0N0 161 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 LBX2Q6XYB7 198 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 TMEM151AQ8N4L1 468 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 GABPB2Q8TAK5 448 aaPredicted RBP11.2□□□□□ -0.62
PTPN7-201ENST00000309017 CENPNQ96H22 339 aaPredicted RBP11.2□□□□□ -0.62
PTPN7-201ENST00000309017 LRCH3Q96II8 777 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 NPLQ9BXD5 320 aaPredicted RBP11.2□□□□□ -0.62
PTPN7-201ENST00000309017 TUBA8Q9NY65 449 aaPredicted RBP11.2□□□□□ -0.62
PTPN7-201ENST00000309017 PTBP2Q9UKA9 531 aaKnown RBP11.2□□□□□ -0.62
PTPN7-201ENST00000309017 FUOMA2VDF0 154 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 AURKAO14965 403 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms