RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CHKBQ9Y259 395 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 PCDHGC4Q9Y5F7 938 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 FAM169AQ9Y6X4 670 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 C5orf42Q9H799 3197 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 MUC22E2RYF6 1773 aaPredicted RBP7.02□□□□□ -1.29
PTCD2-201ENST00000308077 CXorf51AA0A1B0GTR3 108 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 MAGEB16A2A368 324 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 F7P08709 466 aaPredicted RBP7.02□□□□□ -1.29
PTCD2-201ENST00000308077 ERVK-10P10266 1014 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 HLA-DPA1P20036 260 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 ARNTP27540 789 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 MSH2P43246 934 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 ATP1A2P50993 1020 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 SEPT6Q14141 434 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 FRG1Q14331 258 aaKnown RBP7.02□□□□□ -1.29
PTCD2-201ENST00000308077 GRM2Q14416 872 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 MBLAC2Q68D91 279 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 ESRP1Q6NXG1 681 aaKnown RBP7.02□□□□□ -1.29
PTCD2-201ENST00000308077 EP400NLQ6ZTU2 488 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 SRLQ86TD4 932 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 TRABD2AQ86V40 505 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 LRRC6Q86X45 466 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 CTAGE3PQ8IX95 158 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 ETFBKMTQ8IXQ9 262 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 PPHLN1Q8NEY8 458 aaKnown RBP7.02□□□□□ -1.29
PTCD2-201ENST00000308077 OR6K2Q8NGY2 324 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 IFT43Q96FT9 208 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 PKNOX2Q96KN3 472 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 SMIM14Q96QK8 99 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 KXD1Q9BQD3 176 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 SLC2A11Q9BYW1 496 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 TNKS2Q9H2K2 1166 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 MRM3Q9HC36 420 aaKnown RBP7.02□□□□□ -1.29
PTCD2-201ENST00000308077 ZFP14Q9HCL3 533 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 CD320Q9NPF0 282 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 TREX1Q9NSU2 369 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 HAUS2Q9NVX0 235 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 HS3ST2Q9Y278 367 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 RAI2Q9Y5P3 530 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 PSAT1Q9Y617 370 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 A0A1W2PPM1 405 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 HMX2A2RU54 273 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 FZD6O60353 706 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 PIGNO95427 931 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 NFATC1O95644 943 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 NDST3O95803 873 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 ADH1CP00326 375 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 EPOP01588 193 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 FGF1P05230 155 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 PIRTP0C851 137 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 LAMP2P13473 410 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 CES1P23141 567 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 ADRA1DP25100 572 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 GKP32189 559 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 GBP2P32456 591 aaPredicted RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 SLC6A11P48066 632 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 PPP2R2AP63151 447 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 TFF2Q03403 129 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 SLC20A2Q08357 652 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 MGAT5Q09328 741 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 FCHO2Q0JRZ9 810 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 DMC1Q14565 340 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 EMC10Q5UCC4 262 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 NAIF1Q69YI7 327 aaPredicted RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 CES5AQ6NT32 575 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 C22orf39Q6P5X5 142 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 PARM1Q6UWI2 310 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 MARK2Q7KZI7 788 aaKnown RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 SLC26A11Q86WA9 606 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 RASSF3Q86WH2 238 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 MFSD6LQ8IWD5 586 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 SRRM1Q8IYB3 904 aaKnown RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 AHI1Q8N157 1196 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 ZNF557Q8N988 423 aaPredicted RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 PTCD2Q8WV60 388 aaKnown RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 SORCS1Q8WY21 1168 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 FGF14Q92915 247 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 MRGPRX3Q96LB0 322 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 RANBP9Q96S59 729 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 STMN4Q9H169 189 aaPredicted RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 ECT2Q9H8V3 914 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 PPANQ9NQ55 473 aaKnown RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 EVLQ9UI08 416 aaPredicted RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 SLCO3A1Q9UIG8 710 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 ZNF180Q9UJW8 692 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 KCTD3Q9Y597 815 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 SPO11Q9Y5K1 396 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 HEATR9A2RTY3 570 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 MROH6A6NGR9 719 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 GOLGA8TH3BQL2 631 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 TRAFD1O14545 582 aaPredicted RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 LDB2O43679 373 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 TULP3O75386 442 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 INHBAP08476 426 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 POU3F3P20264 500 aaPredicted RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 SP100P23497 879 aaPredicted RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 ATP5DP30049 168 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 ARCN1P48444 511 aaKnown RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 CSNK1DP48730 415 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 DGKGP49619 791 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms