RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 CCNCP24863 283 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 CASP2P42575 452 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 CYP27A1Q02318 531 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 INAVAQ3KP66 663 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 GDAP1Q8TB36 358 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 EDC3Q96F86 508 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 FRMD6Q96NE9 622 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 FHDC1Q9C0D6 1143 aaPredicted RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 SP140LQ9H930 580 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ARL8BQ9NVJ2 186 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 AASSQ9UDR5 926 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 FAM86C2PA6NEL3 165 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 PIGRP01833 764 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 EPHB3P54753 998 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 SLC6A3Q01959 620 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 KDSRQ06136 332 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 RABL3Q5HYI8 236 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 C3orf67Q6ZVT6 689 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 FAM220AQ7Z4H9 259 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 C11orf70Q9BRQ4 267 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 MIOSQ9NXC5 875 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 CDH7Q9ULB5 785 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 S100A9P06702 114 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 MMP10P09238 476 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 CDC25CP30307 473 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 PBX3P40426 434 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ZNF846Q147U1 533 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 FBXW10Q5XX13 1052 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 EGFL6Q8IUX8 553 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 KBTBD2Q8IY47 623 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 METTL25Q8N6Q8 603 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 EXO5Q9H790 373 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 QTRT2Q9H974 415 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 ZNF214Q9UL59 606 aaPredicted RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 GINS2Q9Y248 185 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 RGS5O15539 181 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 HOXD8P13378 290 aaPredicted RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 ADORA1P30542 326 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 NSG1P42857 185 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 C21orf59P57076 290 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 RBBP7Q16576 425 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ANKRD52Q8NB46 1076 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 MFSD14AQ96MC6 490 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 OPTCQ9UBM4 332 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ANK1P16157 1881 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 DDX3YO15523 660 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 SLC28A2O43868 658 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 NPHS1O60500 1241 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ZNF432O94892 652 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ANXA5P08758 320 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ADSSP30520 456 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ICAM3P32942 547 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 GLUD2P49448 558 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 GYS2P54840 703 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ZNF844Q08AG5 666 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ZACNQ401N2 412 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 LDLRAP1Q5SW96 308 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 TMC5Q6UXY8 1006 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ASB18Q6ZVZ8 466 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 C12orf42Q96LP6 360 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 BIRC8Q96P09 236 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 GPR101Q96P66 508 aaPredicted RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 PUS3Q9BZE2 481 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 ZYG11BQ9C0D3 744 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 MUC3BQ9H195 1237 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 MS4A12Q9NXJ0 267 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 PROM1O43490 865 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 IFNA16P05015 189 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 FCER2P06734 321 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 BLKP51451 505 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 AP1S1P61966 158 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ZCCHC12Q6PEW1 402 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 SPICE1Q8N0Z3 855 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 FBXW8Q8N3Y1 598 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 NXF3Q9H4D5 531 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 ETAA1Q9NY74 926 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 EMC3Q9P0I2 261 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 STOX2Q9P2F5 926 aaPredicted RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 DCTN4Q9UJW0 460 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ASAP1Q9ULH1 1129 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 PIN4Q9Y237 131 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 B2RBV5 119 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 CA8P35219 290 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 GRIA2P42262 883 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 SLC1A2P43004 574 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 CEBPAP49715 358 aaPredicted RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 GAS6Q14393 721 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 EFCAB12Q6NXP0 572 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 TIGD4Q8IY51 512 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 YAF2Q8IY57 180 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 THUMPD3Q9BV44 507 aaKnown RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 CATSPERZQ9NTU4 200 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 MTRRQ9UBK8 725 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 NAALADL1Q9UQQ1 740 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 GLI3P10071 1580 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 ADAMTS7Q9UKP4 1686 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 CLIC2O15247 247 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 NTSR2O95665 410 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 ESR1P03372 595 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 CCNB1P14635 433 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms