RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 GCATO75600 419 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 GABBR2O75899 941 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 SLC5A2P31639 672 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 CLDN10P78369 228 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 BEX3Q00994 111 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 CCL14Q16627 93 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 CYP4V2Q6ZWL3 525 aaPredicted RBP14.68□□□□□ -0.06
PTPN9-201ENST00000306726 NPWQ8N729 165 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 HMX1Q9NP08 348 aaPredicted RBP14.68□□□□□ -0.06
PTPN9-201ENST00000306726 MOCS1Q9NZB8 636 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 AFF4Q9UHB7 1163 aaKnown RBP14.68□□□□□ -0.06
PTPN9-201ENST00000306726 C7orf72A4D263 438 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 KLF11O14901 512 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 TIMM44O43615 452 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 CCNT2O60583 730 aaKnown RBP14.67□□□□□ -0.06
PTPN9-201ENST00000306726 CPB1P15086 417 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 KCNA5P22460 613 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 CCR1P32246 355 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 LIMK2P53671 638 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 MYBPC3Q14896 1274 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 LIPMQ5VYY2 423 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 EPGNQ6UW88 154 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 BNIPLQ7Z465 357 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 TMEM74Q96NL1 305 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 NAA50Q9GZZ1 169 aaKnown RBP14.67□□□□□ -0.06
PTPN9-201ENST00000306726 SMIM31A0A1B0GVY4 71 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 MYBPHLA2RUH7 354 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 RRN3P2A6NIE6 340 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 VILLO15195 856 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 ZNF189O75820 626 aaPredicted RBP14.67□□□□□ -0.06
PTPN9-201ENST00000306726 PRKAR2AP13861 404 aaKnown RBP14.67□□□□□ -0.06
PTPN9-201ENST00000306726 ATP6V1B2P21281 511 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 NDST2P52849 883 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 STK32CQ86UX6 486 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 H3BNX3 289 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 B3GAT3O94766 335 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 MMP3P08254 477 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 OR4Q2P0C623 313 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 PABPC4LP0CB38 370 aaKnown RBP14.67□□□□□ -0.06
PTPN9-201ENST00000306726 IL10P22301 178 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 AFF1P51825 1210 aaKnown RBP14.67□□□□□ -0.06
PTPN9-201ENST00000306726 HPCAP84074 193 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 TSTA3Q13630 321 aaPredicted RBP14.67□□□□□ -0.06
PTPN9-201ENST00000306726 MGAT5BQ3V5L5 792 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 TSEN34Q9BSV6 310 aaKnown RBP14.67□□□□□ -0.06
PTPN9-201ENST00000306726 TSPYL2Q9H2G4 693 aaPredicted RBP14.67□□□□□ -0.06
PTPN9-201ENST00000306726 CYP3A43Q9HB55 503 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 GMNNO75496 209 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 HADHAP40939 763 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 LAPTM4AQ15012 233 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 RBBP7Q16576 425 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 RABL3Q5HYI8 236 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 KBTBD6Q86V97 674 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 CIR1Q86X95 450 aaPredicted RBP14.67□□□□□ -0.06
PTPN9-201ENST00000306726 PPHLN1Q8NEY8 458 aaKnown RBP14.67□□□□□ -0.06
PTPN9-201ENST00000306726 SCAMP5Q8TAC9 235 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 GAD1Q99259 594 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 FRMD8Q9BZ67 464 aaPredicted RBP14.67□□□□□ -0.06
PTPN9-201ENST00000306726 CCDC68Q9H2F9 335 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 USP22Q9UPT9 525 aa14.67□□□□□ -0.06
PTPN9-201ENST00000306726 DOCK5Q9H7D0 1870 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 PRORSD1PA6NEY8 169 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 NR1H2P55055 460 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 CDC42EP1Q00587 391 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 TUBB3Q13509 450 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 NFYCQ13952 458 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 COL9A2Q14055 689 aaPredicted RBP14.66□□□□□ -0.06
PTPN9-201ENST00000306726 TXNDC5Q8NBS9 432 aaKnown RBP14.66□□□□□ -0.06
PTPN9-201ENST00000306726 RMDN1Q96DB5 314 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 CNTN6Q9UQ52 1028 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 MAGED1Q9Y5V3 778 aaPredicted RBP14.66□□□□□ -0.06
PTPN9-201ENST00000306726 MYO7AQ13402 2215 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 A0A0J9YVX5 310 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 LRIG2O94898 1065 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 MATKP42679 507 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 KPNA1P52294 538 aaPredicted RBP14.66□□□□□ -0.06
PTPN9-201ENST00000306726 GRIK4Q16099 956 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 RNF180Q86T96 592 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 B3GALNT2Q8NCR0 500 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 ARRDC4Q8NCT1 418 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 FBXO30Q8TB52 745 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 NACA2Q9H009 215 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 FZD8Q9H461 694 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 TRNAU1APQ9NX07 287 aaKnown RBP14.66□□□□□ -0.06
PTPN9-201ENST00000306726 AASSQ9UDR5 926 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 PRSS56P0CW18 603 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 CDK4P11802 303 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 STX5Q13190 355 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 TIGD2Q4W5G0 525 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 NEPROQ6NW34 567 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 KLHL35Q6PF15 583 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 CUZD1Q86UP6 607 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 ARL10Q8N8L6 244 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 RP9Q8TA86 221 aaKnown RBP14.66□□□□□ -0.06
PTPN9-201ENST00000306726 SLC35F5Q8WV83 523 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 FAM96AQ9H5X1 160 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 MTMR10Q9NXD2 777 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 FBXO5Q9UKT4 447 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 RAD54BQ9Y620 910 aa14.66□□□□□ -0.06
PTPN9-201ENST00000306726 G3V2L1 256 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms