RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 RBL1P28749 1068 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 MMP12P39900 470 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GRIA4P48058 902 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 C21orf59P57076 290 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 RACK1P63244 317 aaKnown RBP11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 LMNB2Q03252 620 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 KLF1Q13351 362 aaPredicted RBP11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 STAT4Q14765 748 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SF3A2Q15428 464 aaKnown RBP11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SEL1L3Q68CR1 1132 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TCEAL6Q6IPX3 200 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PID1Q7Z2X4 250 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ZSWIM9Q86XI8 627 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SLC13A5Q86YT5 568 aaPredicted RBP11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TCEAL3Q969E4 200 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 LRRC45Q96CN5 670 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 IFT43Q96FT9 208 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SLC6A18Q96N87 628 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 RBM15Q96T37 977 aaKnown RBP eCLIP11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 MYOCQ99972 504 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 WRAP53Q9BUR4 548 aaKnown RBP11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 EDEM2Q9BV94 578 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TLR10Q9BXR5 811 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TDRD1Q9BXT4 1180 aaKnown RBP11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 FRMD8P1Q9BZ68 369 aaPredicted RBP11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SLC25A51Q9H1U9 297 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GLOD4Q9HC38 313 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PCDH9Q9HC56 1237 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 RSPH14Q9UHP6 348 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GGT7Q9UJ14 662 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TRHDEQ9UKU6 1024 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 DNPEPQ9ULA0 475 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ZFR2Q9UPR6 939 aaKnown RBP11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 MYO15AQ9UKN7 3530 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CACNA1EQ15878 2313 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TDRD6O60522 2096 aaKnown RBP11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CFAP69A5D8W1 941 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GOLGA6CA6NDK9 693 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GOLGA6BA6NDN3 693 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 IGLON5A6NGN9 336 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 USP27XA6NNY8 438 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 AREL1O15033 823 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 LZTS3O60299 673 aaPredicted RBP11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 MAGEC1O60732 1142 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 MMP20O60882 483 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PRKCGP05129 697 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GOLGA6DP0CG33 693 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PRLRP16471 622 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 NFKB1P19838 968 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CD38P28907 300 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CXCR5P32302 372 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SKOR1P84550 965 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 NIPAL4Q0D2K0 466 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 WASHC5Q12768 1159 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ARHGEF7Q14155 803 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PRPSAP1Q14558 356 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SLC14A2Q15849 920 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PCSK7Q16549 785 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 LONRF2Q1L5Z9 754 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ZNF284Q2VY69 593 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TMEM52BQ4KMG9 183 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TMEM259Q4ZIN3 620 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CCDC70Q6NSX1 233 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 IL27RAQ6UWB1 636 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 DPPA4Q7L190 304 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ZNF567Q8N184 647 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CNTD1Q8N815 330 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 DENND6BQ8NEG7 585 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 LPCAT1Q8NF37 534 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ARRDC2Q8TBH0 407 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 VOPP1Q96AW1 172 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 IMP4Q96G21 291 aaKnown RBP11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TEKT5Q96M29 485 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PPP1R2P1Q96PQ5 205 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GTPBP2Q9BX10 602 aaKnown RBP11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ADGRE3Q9BY15 652 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SLC17A9Q9BYT1 436 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ZDHHC5Q9C0B5 715 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 FZD3Q9NPG1 666 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GOLGA6AQ9NYA3 693 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CHKBQ9Y259 395 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 FAM186AA6NE01 2351 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SCN8AQ9UQD0 1980 aa11.06□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TCRBV7S2A1N4TA0A589 114 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 LNP1A1A4G5 178 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 A6NNZ2 444 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 F5H423 210 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SPINT1O43278 529 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 OPHN1O60890 802 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CER1O95813 267 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 FGGP02679 453 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 C6P13671 934 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CTPS1P17812 591 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ENGP17813 658 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 HOXD11P31277 338 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 VIPR1P32241 457 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ACTN2P35609 894 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 RPL26P61254 145 aaKnown RBP11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 IRX4P78413 519 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms