RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 CCDC189A1A4V9 331 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 MSI1O43347 362 aaKnown RBP13.36□□□□□ -0.27
DDX54-201ENST00000306014 PSEN2P49810 448 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 PCLAFQ15004 111 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 TTLL9Q3SXZ7 439 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 SLC39A12Q504Y0 691 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 SLC9A4Q6AI14 798 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 OLFML1Q6UWY5 402 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 PDSS2Q86YH6 399 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 C8orf59Q8N0T1 100 aaPredicted RBP13.36□□□□□ -0.27
DDX54-201ENST00000306014 UGT2B28Q9BY64 529 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 ROGDIQ9GZN7 287 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 EIF2B3Q9NR50 452 aaKnown RBP13.36□□□□□ -0.27
DDX54-201ENST00000306014 IMPAD1Q9NX62 359 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 UXTQ9UBK9 157 aaPredicted RBP13.36□□□□□ -0.27
DDX54-201ENST00000306014 SEC22BO75396 215 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 RHOCP08134 193 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 GM2AP17900 193 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 GPR158Q5T848 1215 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 MILR1Q7Z6M3 343 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 TMEM110Q86TL2 294 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 SFRP1Q8N474 314 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 FBXO27Q8NI29 283 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 HEXDCQ8WVB3 486 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 TMEM161AQ9NX61 479 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 IGSF9Q9P2J2 1179 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 PRKAG2Q9UGJ0 569 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 PPEF2O14830 753 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 SNAP91O60641 907 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 BNIP2Q12982 314 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 RAB6CQ53S08 254 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 SYPL2Q5VXT5 272 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 BNIPLQ7Z465 357 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 OR2T34Q8NGX1 318 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 OR2T3Q8NH03 318 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 C19orf60Q96EN9 201 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 RAB6CQ9H0N0 254 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 LEF1Q9UJU2 399 aaPredicted RBP13.35□□□□□ -0.27
DDX54-201ENST00000306014 CDH9Q9ULB4 789 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 PNMA8BQ9ULN7 279 aaPredicted RBP13.35□□□□□ -0.27
DDX54-201ENST00000306014 SLC8A2Q9UPR5 921 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 HCRTO43612 131 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 PAGE1O75459 146 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 CPSF4O95639 269 aaKnown RBP13.35□□□□□ -0.27
DDX54-201ENST00000306014 CKMT2P17540 419 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 PPP3CCP48454 512 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 TNK2Q07912 1038 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 GRIK3Q13003 919 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 RAP1GAP2Q684P5 730 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 REP15Q6BDI9 236 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 SPESP1Q6UW49 350 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 VPS37AQ8NEZ2 397 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 BPIFB6Q8NFQ5 453 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 ADGRE3Q9BY15 652 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 HAPLN2Q9GZV7 340 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 RIBC2Q9H4K1 309 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 ELOVL6Q9H5J4 265 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 RMND5AQ9H871 391 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 PALMDQ9NP74 551 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 DERAQ9Y315 318 aa13.35□□□□□ -0.27
DDX54-201ENST00000306014 LINC00854A0A1B0GVQ3 168 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 TMEM233B4DJY2 109 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 ALDH1A1P00352 501 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 FGF3P11487 239 aaPredicted RBP13.34□□□□□ -0.27
DDX54-201ENST00000306014 HOXB8P17481 243 aaPredicted RBP13.34□□□□□ -0.27
DDX54-201ENST00000306014 RAB27AP51159 221 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 DEFA1P59665 94 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 DEFA3P59666 94 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 IL2P60568 153 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 LSM3P62310 102 aaKnown RBP13.34□□□□□ -0.27
DDX54-201ENST00000306014 MAP3K10Q02779 954 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 HECTD2Q5U5R9 776 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 TOP6BLQ8N6T0 577 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 EMID1Q96A84 441 aaPredicted RBP13.34□□□□□ -0.27
DDX54-201ENST00000306014 CCDC106Q9BWC9 280 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 OXSMQ9NWU1 459 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 CNTNAP1P78357 1384 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 YJEFN3A6XGL0 299 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 DPYSL4O14531 572 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 RGS5O15539 181 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 RNASEH1O60930 286 aaKnown RBP13.34□□□□□ -0.27
DDX54-201ENST00000306014 RGS20O76081 388 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 ARIH2O95376 493 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 C22orf31O95567 290 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 ADSLP30566 484 aaPredicted RBP13.34□□□□□ -0.27
DDX54-201ENST00000306014 GMPRP36959 345 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 CDH18Q13634 790 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 PTPRNQ16849 979 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 PERM1Q5SV97 790 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 SDHAF4Q5VUM1 108 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 PAOXQ6QHF9 649 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 PHF12Q96QT6 1004 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 TRMOQ9BU70 441 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 SENP6Q9GZR1 1112 aaPredicted RBP13.34□□□□□ -0.27
DDX54-201ENST00000306014 FBXO44Q9H4M3 255 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 TIMMDC1Q9NPL8 285 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 GLI3P10071 1580 aa13.34□□□□□ -0.27
DDX54-201ENST00000306014 SIPA1L3O60292 1781 aaPredicted RBP13.34□□□□□ -0.27
DDX54-201ENST00000306014 KPNA4O00629 521 aaPredicted RBP13.34□□□□□ -0.27
DDX54-201ENST00000306014 AIF1P55008 147 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms