RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 TRAFD1O14545 582 aaPredicted RBP26.62■■□□□ 1.85
CDKN2A-201ENST00000304494 SOCS5O75159 536 aa26.62■■□□□ 1.85
CDKN2A-201ENST00000304494 MTA2O94776 668 aa26.62■■□□□ 1.85
CDKN2A-201ENST00000304494 NME1P15531 152 aaKnown RBP26.62■■□□□ 1.85
CDKN2A-201ENST00000304494 MMP13P45452 471 aa26.62■■□□□ 1.85
CDKN2A-201ENST00000304494 ACADVLP49748 655 aa26.62■■□□□ 1.85
CDKN2A-201ENST00000304494 LIG3P49916 1009 aa26.62■■□□□ 1.85
CDKN2A-201ENST00000304494 GALNT2Q10471 571 aa26.62■■□□□ 1.85
CDKN2A-201ENST00000304494 DNAJC3Q13217 504 aa26.62■■□□□ 1.85
CDKN2A-201ENST00000304494 ZNF542PQ5EBM4 170 aa26.62■■□□□ 1.85
CDKN2A-201ENST00000304494 NCBP2-AS2Q69YL0 99 aa26.62■■□□□ 1.85
CDKN2A-201ENST00000304494 KDF1Q8NAX2 398 aaPredicted RBP26.62■■□□□ 1.85
CDKN2A-201ENST00000304494 OR4C6Q8NH72 309 aa26.62■■□□□ 1.85
CDKN2A-201ENST00000304494 RFFLQ8WZ73 363 aa26.62■■□□□ 1.85
CDKN2A-201ENST00000304494 MFSD11O43934 449 aa26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 LZTS3O60299 673 aaPredicted RBP26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 CR2P20023 1033 aa26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 GARSP41250 739 aaKnown RBP26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 ILKQ13418 452 aa26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 AGERQ15109 404 aa26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 SMAD1Q15797 465 aaKnown RBP26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 TIGD7Q6NT04 549 aaPredicted RBP26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 DHRS13Q6UX07 377 aa26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 PGBD5Q8N414 524 aa26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 BTN2A2Q8WVV5 523 aa26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 SPOCK2Q92563 424 aa26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 FAF2Q96CS3 445 aa26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 MBNL1Q9NR56 388 aaKnown RBP26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 HAUS2Q9NVX0 235 aa26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 NLGN3Q9NZ94 848 aa26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 COQ6Q9Y2Z9 468 aa26.61■■□□□ 1.85
CDKN2A-201ENST00000304494 TRIM38O00635 465 aa26.6■■□□□ 1.85
CDKN2A-201ENST00000304494 FFAR2O15552 330 aa26.6■■□□□ 1.85
CDKN2A-201ENST00000304494 SIGLEC6O43699 453 aa26.6■■□□□ 1.85
CDKN2A-201ENST00000304494 NFKBIAP25963 317 aa26.6■■□□□ 1.85
CDKN2A-201ENST00000304494 IRF4Q15306 451 aa26.6■■□□□ 1.85
CDKN2A-201ENST00000304494 PROX2Q3B8N5 592 aa26.6■■□□□ 1.85
CDKN2A-201ENST00000304494 NOD2Q9HC29 1040 aa26.6■■□□□ 1.85
CDKN2A-201ENST00000304494 WDFY3Q8IZQ1 3526 aa26.6■■□□□ 1.85
CDKN2A-201ENST00000304494 SCAMP1O15126 338 aa26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 HTRA2O43464 458 aaPredicted RBP26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 PRKCGP05129 697 aa26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 ELFN1P0C7U0 828 aa26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 MX2P20592 715 aa26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 PEX5P50542 639 aa26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 IFI16Q16666 785 aaKnown RBP26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 WSCD2Q2TBF2 565 aa26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 MACC1Q6ZN28 852 aa26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 DPPA4Q7L190 304 aa26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 TEX26Q8N6G2 289 aa26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 TC2NQ8N9U0 490 aa26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 ZNF548Q8NEK5 533 aaPredicted RBP26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 FATE1Q969F0 183 aa26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 DUSP23Q9BVJ7 150 aa26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 PCDHGC4Q9Y5F7 938 aa26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 CSNK1G3Q9Y6M4 447 aa26.59■■□□□ 1.85
CDKN2A-201ENST00000304494 TTC24A2A3L6 582 aaPredicted RBP26.58■■□□□ 1.85
CDKN2A-201ENST00000304494 ZNF487B1APH4 448 aa26.58■■□□□ 1.85
CDKN2A-201ENST00000304494 JUNDP17535 347 aa26.58■■□□□ 1.85
CDKN2A-201ENST00000304494 KDELR1P24390 212 aa26.58■■□□□ 1.85
CDKN2A-201ENST00000304494 ACP1P24666 158 aa26.58■■□□□ 1.85
CDKN2A-201ENST00000304494 MAXP61244 160 aa26.58■■□□□ 1.85
CDKN2A-201ENST00000304494 TCEAL1Q15170 157 aa26.58■■□□□ 1.85
CDKN2A-201ENST00000304494 TPRG1LQ5T0D9 272 aa26.58■■□□□ 1.85
CDKN2A-201ENST00000304494 KDM7AQ6ZMT4 941 aa26.58■■□□□ 1.85
CDKN2A-201ENST00000304494 TMPRSS12Q86WS5 348 aa26.58■■□□□ 1.85
CDKN2A-201ENST00000304494 PDCD6IPQ8WUM4 868 aaKnown RBP26.58■■□□□ 1.85
CDKN2A-201ENST00000304494 NSMCE3Q96MG7 304 aa26.58■■□□□ 1.85
CDKN2A-201ENST00000304494 MATN3O15232 486 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 CPP00450 1065 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 CCNCP24863 283 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 SLC1A1P43005 524 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 DAB2P98082 770 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 SEMG2Q02383 582 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 RALGDSQ12967 914 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 EIF2B5Q13144 721 aaKnown RBP26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 LIPIQ6XZB0 460 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 VSIG1Q86XK7 387 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 PQLC3Q8N755 202 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 ZCCHC14Q8WYQ9 949 aaKnown RBP26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 RAPGEF5Q92565 580 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 TBATAQ96M53 351 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 TSGA13Q96PP4 275 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 POLR1EQ9GZS1 481 aaKnown RBP26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 NT5MQ9NPB1 228 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 EVA1BQ9NVM1 165 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 SPASTQ9UBP0 616 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 AMACRQ9UHK6 382 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 KLF15Q9UIH9 416 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 AKAP13Q12802 2813 aa26.57■■□□□ 1.84
CDKN2A-201ENST00000304494 LRRD1A4D1F6 860 aa26.56■■□□□ 1.84
CDKN2A-201ENST00000304494 AQP9O43315 295 aa26.56■■□□□ 1.84
CDKN2A-201ENST00000304494 GIMD1P0DJR0 217 aa26.56■■□□□ 1.84
CDKN2A-201ENST00000304494 HTR1BP28222 390 aa26.56■■□□□ 1.84
CDKN2A-201ENST00000304494 HNF1BP35680 557 aa26.56■■□□□ 1.84
CDKN2A-201ENST00000304494 MTM1Q13496 603 aa26.56■■□□□ 1.84
CDKN2A-201ENST00000304494 ODF2Q5BJF6 829 aa26.56■■□□□ 1.84
CDKN2A-201ENST00000304494 LRRC38Q5VT99 294 aa26.56■■□□□ 1.84
CDKN2A-201ENST00000304494 MAML1Q92585 1016 aa26.56■■□□□ 1.84
CDKN2A-201ENST00000304494 ZNF830Q96NB3 372 aaPredicted RBP26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms