RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 POMGNT2Q8NAT1 580 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 ZNF540Q8NDQ6 660 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 GSTCDQ8NEC7 633 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 ASZ1Q8WWH4 475 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 COL26A1Q96A83 441 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 VPS35Q96QK1 796 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 B3GNT5Q9BYG0 378 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 CLEC4MQ9H2X3 399 aaPredicted RBP14.01□□□□□ -0.17
PRKCB-201ENST00000303531 CNGB3Q9NQW8 809 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 MAPRE3Q9UPY8 281 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 PGK1P00558 417 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 CCNA2P20248 432 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 LPOP22079 712 aaPredicted RBP14□□□□□ -0.17
PRKCB-201ENST00000303531 MMP8P22894 467 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 CDK18Q07002 472 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 NOMO2Q5JPE7 1267 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 CERCAMQ5T4B2 595 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 KIAA0408Q6ZU52 694 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 CLYBLQ8N0X4 340 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 GPR156Q8NFN8 814 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 EPB41L1Q9H4G0 881 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 PRPF19Q9UMS4 504 aaKnown RBP14□□□□□ -0.17
PRKCB-201ENST00000303531 GSTK1Q9Y2Q3 226 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 KPNA5O15131 536 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 MAGEC1O60732 1142 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 PPP1R11O60927 126 aaPredicted RBP14□□□□□ -0.17
PRKCB-201ENST00000303531 LYPLA2O95372 231 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 RPL9P32969 192 aaKnown RBP14□□□□□ -0.17
PRKCB-201ENST00000303531 POTEHQ6S545 545 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 LINGO1Q96FE5 620 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 TCF12Q99081 682 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 EGFL7Q9UHF1 273 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 POLR1DQ9Y2S0 133 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 TRAV19A0A0A6YYK7 116 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 IDO1P14902 403 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 CTPS1P17812 591 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 ARF4P18085 180 aaPredicted RBP14□□□□□ -0.17
PRKCB-201ENST00000303531 ATP6V0D1P61421 351 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 XKR6Q5GH73 641 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 NPAS2Q99743 824 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 ADI1Q9BV57 179 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 ST3GAL5Q9UNP4 418 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 ADCY6O43306 1168 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 CABYRO75952 493 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 WNT3AP56704 352 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 FCRL2Q96LA5 508 aaPredicted RBP14□□□□□ -0.17
PRKCB-201ENST00000303531 ZNHIT2Q9UHR6 403 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 RPL26L1Q9UNX3 145 aaKnown RBP14□□□□□ -0.17
PRKCB-201ENST00000303531 VWA7Q9Y334 891 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 AP4B1Q9Y6B7 739 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 NOL4O94818 638 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 ARMC3Q5W041 872 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 FAM20CQ8IXL6 584 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 IZUMO1Q8IYV9 350 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 SFRP1Q8N474 314 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 TOP6BLQ8N6T0 577 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 ZNF671Q8TAW3 534 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 CXorf40AQ8TE69 158 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 CPXM1Q96SM3 734 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 OSBPL11Q9BXB4 747 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 PNPLA3Q9NST1 481 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 NCKAP1Q9Y2A7 1128 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 CDH13P55290 713 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 AAGABQ6PD74 315 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 RBM44Q6ZP01 1051 aaKnown RBP14□□□□□ -0.17
PRKCB-201ENST00000303531 ARMC8Q8IUR7 673 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 PLEKHG4BQ96PX9 1271 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 C1QTNF7Q9BXJ2 289 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 PRDM4Q9UKN5 801 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 ANGPT4Q9Y264 503 aa14□□□□□ -0.17
PRKCB-201ENST00000303531 FAM155BO75949 473 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 ENO2P09104 434 aaPredicted RBP13.99□□□□□ -0.17
PRKCB-201ENST00000303531 SPIRE1Q08AE8 756 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 IKBKEQ14164 716 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 C9orf57Q5W0N0 161 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 USP50Q70EL3 339 aaPredicted RBP13.99□□□□□ -0.17
PRKCB-201ENST00000303531 SLC44A1Q8WWI5 657 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 NXF3Q9H4D5 531 aaKnown RBP13.99□□□□□ -0.17
PRKCB-201ENST00000303531 CLN6Q9NWW5 311 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 NFKBIL1Q9UBC1 381 aaPredicted RBP13.99□□□□□ -0.17
PRKCB-201ENST00000303531 AGO1Q9UL18 857 aaKnown RBP13.99□□□□□ -0.17
PRKCB-201ENST00000303531 TBC1D30Q9Y2I9 924 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 TBC1D3BA6NDS4 549 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 SLC7A2P52569 658 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 CRYBB1P53674 252 aaPredicted RBP13.99□□□□□ -0.17
PRKCB-201ENST00000303531 CPSF6Q16630 551 aaKnown RBP eCLIP13.99□□□□□ -0.174e-8■■□□□ 12.1
PRKCB-201ENST00000303531 RAET1GQ6H3X3 334 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 XYLT1Q86Y38 959 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 CD101Q93033 1021 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 ABCG8Q9H221 673 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 PLLPQ9Y342 182 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 TCRBV7S2A1N4TA0A589 114 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 FARP2O94887 1054 aaPredicted RBP13.99□□□□□ -0.17
PRKCB-201ENST00000303531 LYPLAL1Q5VWZ2 237 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 TATDN1Q6P1N9 297 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 KLHL5Q96PQ7 755 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 STX11O75558 287 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 CXCR2P25025 360 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 RGS21Q2M5E4 152 aa13.99□□□□□ -0.17
PRKCB-201ENST00000303531 HIPK1Q86Z02 1210 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms