RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 C6orf89Q6UWU4 347 aa14.59□□□□□ -0.07
SHCBP1-201ENST00000303383 YTHDF3Q7Z739 585 aaKnown RBP14.59□□□□□ -0.07
SHCBP1-201ENST00000303383 FAM217AQ8IXS0 508 aa14.59□□□□□ -0.07
SHCBP1-201ENST00000303383 STYXQ8WUJ0 223 aa14.59□□□□□ -0.07
SHCBP1-201ENST00000303383 BBS2Q9BXC9 721 aa14.59□□□□□ -0.07
SHCBP1-201ENST00000303383 TMEM216Q9P0N5 145 aa14.59□□□□□ -0.07
SHCBP1-201ENST00000303383 ANKRD6Q9Y2G4 727 aa14.59□□□□□ -0.07
SHCBP1-201ENST00000303383 USH1CQ9Y6N9 552 aa14.59□□□□□ -0.07
SHCBP1-201ENST00000303383 A0A0G2JND7 137 aa14.58□□□□□ -0.07
SHCBP1-201ENST00000303383 NEDD8-MDP1E9PL57 170 aa14.58□□□□□ -0.07
SHCBP1-201ENST00000303383 C5orf67F2Z3F1 127 aa14.58□□□□□ -0.07
SHCBP1-201ENST00000303383 H0YHG0 523 aa14.58□□□□□ -0.07
SHCBP1-201ENST00000303383 HAUS5O94927 633 aa14.58□□□□□ -0.07
SHCBP1-201ENST00000303383 HOXA9P31269 272 aa14.58□□□□□ -0.07
SHCBP1-201ENST00000303383 ACCSLQ4AC99 568 aa14.58□□□□□ -0.07
SHCBP1-201ENST00000303383 PDE12Q6L8Q7 609 aaKnown RBP14.58□□□□□ -0.07
SHCBP1-201ENST00000303383 LMNTD2Q8IXW0 634 aa14.58□□□□□ -0.07
SHCBP1-201ENST00000303383 OR13J1Q8NGT2 312 aa14.58□□□□□ -0.07
SHCBP1-201ENST00000303383 SAMD11Q96NU1 681 aa14.58□□□□□ -0.07
SHCBP1-201ENST00000303383 MFSD1Q9H3U5 465 aa14.58□□□□□ -0.07
SHCBP1-201ENST00000303383 ALPK3Q96L96 1907 aa14.58□□□□□ -0.07
SHCBP1-201ENST00000303383 CHD5Q8TDI0 1954 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 LDB2O43679 373 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 RPP40O75818 363 aaKnown RBP14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 ZMPSTE24O75844 475 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 CR2P20023 1033 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 RAB10P61026 200 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 NSUN2Q08J23 767 aaKnown RBP eCLIP14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 TBC1D1Q86TI0 1168 aaPredicted RBP14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 CRLF3Q8IUI8 442 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 OR13C4Q8NGS5 318 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 FIBINQ8TAL6 211 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 TTC8Q8TAM2 541 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 SUDS3Q9H7L9 328 aaPredicted RBP14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 ABCB8Q9NUT2 735 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 ZNF358Q9NW07 568 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 PCDHB9Q9Y5E1 797 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 LAMA2P24043 3122 aaKnown RBP14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 MROH6A6NGR9 719 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 MT-CO1P00395 513 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 CPA3P15088 417 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 POLD2P49005 469 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 BST1Q10588 318 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 PLEKHG6Q3KR16 790 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 C9orf50Q5SZB4 431 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 ZCCHC23Q6ZST2 131 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 METTL3Q86U44 580 aaKnown RBP14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 OR6K2Q8NGY2 324 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 PPP4R1Q8TF05 950 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 TSPAN17Q96FV3 270 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 TLE6Q9H808 572 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 NMRAL1Q9HBL8 299 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 TBC1D14Q9P2M4 693 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 PRRC2BQ5JSZ5 2229 aaKnown RBP14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 OBSL1O75147 1896 aa14.58□□□□□ -0.08
SHCBP1-201ENST00000303383 ATXN2Q99700 1313 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 OR51F1A6NGY5 319 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 CRABP2P29373 138 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 GMPRP36959 345 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 ABL2P42684 1182 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 ARSDP51689 593 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 KPNA2P52292 529 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 IRF9Q00978 393 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 ARMC12Q5T9G4 340 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 CGB2Q6NT52 195 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 CNSTQ6PJW8 725 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 SMG7Q92540 1137 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 PEX13Q92968 403 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 ZDHHC7Q9NXF8 308 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 RUVBL2Q9Y230 463 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 HCFC2Q9Y5Z7 792 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 K7ERQ8 282 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 NRG2O14511 850 aaPredicted RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 STX7O15400 261 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 ARHGEF15O94989 841 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 IGSF6O95976 241 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 GOT2P00505 430 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 PDHA1P08559 390 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 GABRB3P28472 473 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 CD70P32970 193 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 CLCN5P51795 746 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 EPHA5P54756 1037 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 AP1S1P61966 158 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 POU4F1Q01851 419 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 ZBTB16Q05516 673 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 BCL2L1Q07817 233 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 PTPRCAPQ14761 206 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 FAM109BQ6ICB4 259 aaPredicted RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 LDB1Q86U70 411 aaPredicted RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 ACVR1CQ8NER5 493 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 OR4K2Q8NGD2 314 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 RAB3IL1Q8TBN0 382 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 SCG3Q8WXD2 468 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 ISL2Q96A47 359 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 NDNQ99608 321 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 CCDC68Q9H2F9 335 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 CATSPERZQ9NTU4 200 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 CPSF2Q9P2I0 782 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 SLC25A13Q9UJS0 675 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 MTCL1Q9Y4B5 1905 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms