RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 HDAC8Q9BY41 377 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 RAB17Q9H0T7 212 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 LRRC40Q9H9A6 602 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 FBRSQ9HAH7 460 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 PLAC1Q9HBJ0 212 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 ITM2CQ9NQX7 267 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 USP36Q9P275 1121 aaKnown RBP9.55□□□□□ -0.88
RFX3-201ENST00000302303 UTP11Q9Y3A2 253 aaKnown RBP9.55□□□□□ -0.88
RFX3-201ENST00000302303 A0A0J9YYE9 177 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 NPIPB15A6NHN6 443 aaPredicted RBP9.54□□□□□ -0.88
RFX3-201ENST00000302303 GOLGA8MH3BSY2 632 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 TNFRSF10AO00220 468 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 KPNA3O00505 521 aaPredicted RBP9.54□□□□□ -0.88
RFX3-201ENST00000302303 AURKAO14965 403 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 PSMD3O43242 534 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 BANF1O75531 89 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 IGLV3-19P01714 112 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 TRBC1P01850 177 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 ALPIP09923 528 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 PIRTP0C851 137 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 TPH1P17752 444 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 GM2AP17900 193 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 C5AR1P21730 350 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 LHCGRP22888 699 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 HNF1BP35680 557 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 PSMD8P48556 350 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 RPL26P61254 145 aaKnown RBP9.54□□□□□ -0.88
RFX3-201ENST00000302303 SEMG2Q02383 582 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 RAD51Q06609 339 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 RALGDSQ12967 914 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 MTM1Q13496 603 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 PRPSAP1Q14558 356 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 STARD3Q14849 445 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 CERCAMQ5T4B2 595 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 ARMC12Q5T9G4 340 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 ZNF776Q68DI1 518 aaPredicted RBP9.54□□□□□ -0.88
RFX3-201ENST00000302303 LRRC8BQ6P9F7 803 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 MICALCLQ6ZW33 695 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 CACUL1Q86Y37 369 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 IGDCC3Q8IVU1 814 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 MPP5Q8N3R9 675 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 SLC25A41Q8N5S1 370 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 FRMD1Q8N878 549 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 PBXIP1Q96AQ6 731 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 SCRN2Q96FV2 425 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 SIGLEC10Q96LC7 697 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 SERPINB12Q96P63 405 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 LYSMD1Q96S90 227 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 PABPC3Q9H361 631 aaKnown RBP9.54□□□□□ -0.88
RFX3-201ENST00000302303 MFSD1Q9H3U5 465 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 GGT7Q9UJ14 662 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 ANAPC5Q9UJX4 755 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 PHTF1Q9UMS5 762 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 RPL26L1Q9UNX3 145 aaKnown RBP9.54□□□□□ -0.88
RFX3-201ENST00000302303 SHOC2Q9UQ13 582 aa9.54□□□□□ -0.88
RFX3-201ENST00000302303 USP34Q70CQ2 3546 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 A0A1W2PP55 124 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 E7ESA3 106 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 CTIFO43310 598 aaKnown RBP9.53□□□□□ -0.88
RFX3-201ENST00000302303 LDB2O43679 373 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 GPR37L1O60883 481 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 ADH1BP00325 375 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 CPP00450 1065 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 MLNP12872 115 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 ADRB3P13945 408 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 CTPS1P17812 591 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 HLA-DPA1P20036 260 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 PSMA3P25788 255 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 HOXA6P31267 233 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 MAGEA9P43362 315 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 CXCL12P48061 93 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 PXNP49023 591 aaPredicted RBP9.53□□□□□ -0.88
RFX3-201ENST00000302303 TPMTP51580 245 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 PLTPP55058 493 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 PTSQ03393 145 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 ZBTB16Q05516 673 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 TMEM31Q5JXX7 168 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 NAPEPLDQ6IQ20 393 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 BRAT1Q6PJG6 821 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 TSSK4Q6SA08 328 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 CRTC1Q6UUV9 634 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 ERN2Q76MJ5 926 aaKnown RBP9.53□□□□□ -0.88
RFX3-201ENST00000302303 PCGF5Q86SE9 256 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 DSG4Q86SJ6 1040 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 TSPAN33Q86UF1 283 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 TTC30BQ8N4P2 665 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 HDDC3Q8N4P3 179 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 FBXL6Q8N531 539 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 LPCAT1Q8NF37 534 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 PDCD6IPQ8WUM4 868 aaKnown RBP9.53□□□□□ -0.88
RFX3-201ENST00000302303 SIPA1Q96FS4 1042 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 ZNF778Q96MU6 729 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 PPP1R2P1Q96PQ5 205 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 TRIM56Q9BRZ2 755 aaKnown RBP9.53□□□□□ -0.88
RFX3-201ENST00000302303 IER2Q9BTL4 223 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 PCDH12Q9NPG4 1184 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 PRMT8Q9NR22 394 aaPredicted RBP9.53□□□□□ -0.88
RFX3-201ENST00000302303 HAUS2Q9NVX0 235 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 ITM2BQ9Y287 266 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 FADS3Q9Y5Q0 445 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms