RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 KCNJ8Q15842 424 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 TMEM132AQ24JP5 1023 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 ZNF280DQ6N043 979 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 GADL1Q6ZQY3 521 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 SAMD7Q7Z3H4 446 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 PIWIL3Q7Z3Z3 882 aaKnown RBP10.95□□□□□ -0.66
ZNF558-201ENST00000301475 PIWIL4Q7Z3Z4 852 aaKnown RBP10.95□□□□□ -0.66
ZNF558-201ENST00000301475 ACOT1Q86TX2 421 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 DDIASQ8IXT1 998 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 ANKRD13AQ8IZ07 590 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 DHRSXQ8N5I4 330 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 TMCO5AQ8N6Q1 288 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 CNDP2Q96KP4 475 aaKnown RBP10.95□□□□□ -0.66
ZNF558-201ENST00000301475 MLPHQ9BV36 600 aaPredicted RBP10.95□□□□□ -0.66
ZNF558-201ENST00000301475 HERC2P3Q9BVR0 1158 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 EIF2AQ9BY44 585 aaKnown RBP10.95□□□□□ -0.66
ZNF558-201ENST00000301475 LHPPQ9H008 270 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 CYP4F12Q9HCS2 524 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 SMPD3Q9NY59 655 aaPredicted RBP10.95□□□□□ -0.66
ZNF558-201ENST00000301475 PSME2Q9UL46 239 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 RAD54BQ9Y620 910 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 DGKBQ9Y6T7 804 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 RLFQ13129 1914 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 ATP6AP2A0A1C7CYW4 349 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 C9JVG2 144 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 NFKBIEO00221 500 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 LSM1O15116 133 aaKnown RBP10.95□□□□□ -0.66
ZNF558-201ENST00000301475 KDM1AO60341 852 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 ATP6AP2O75787 350 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 AHSGP02765 367 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 CHRM3P20309 590 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 PTPN3P26045 913 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 AXLP30530 894 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 RCVRNP35243 200 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 GJA9P57773 515 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 PITX1P78337 314 aaPredicted RBP10.95□□□□□ -0.66
ZNF558-201ENST00000301475 SPCS2Q15005 226 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 PRAMEF18Q5VWM3 479 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 ZNF773Q6PK81 442 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 HACD2Q6Y1H2 254 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 FAM35AQ86V20 835 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 ERO1BQ86YB8 467 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 PSTKQ8IV42 348 aaKnown RBP10.95□□□□□ -0.66
ZNF558-201ENST00000301475 C7orf31Q8N865 590 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 REPS2Q8NFH8 660 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 HPS1Q92902 700 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 ZUFSPQ96AP4 578 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 MYRFLQ96LU7 910 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 ZNF641Q96N77 438 aaPredicted RBP10.95□□□□□ -0.66
ZNF558-201ENST00000301475 TBC1D13Q9NVG8 400 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 SSC5DA1L4H1 1573 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 AQP12BA6NM10 295 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 FXYD1O00168 92 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 WNT10BO00744 389 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 MT-ND1P03886 318 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 IQCF3P0C7M6 154 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 MBL2P11226 248 aaPredicted RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 NR4A1P22736 598 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 PSMA4P25789 261 aaKnown RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 IFITM3Q01628 133 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 PRPSAP1Q14558 356 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 PHKG1Q16816 387 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 CCNYL2Q5T2Q4 361 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 ZNF618Q5T7W0 954 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 KCTD11Q693B1 232 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 GTF2IRD2BQ6EKJ0 949 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 SLC26A9Q7LBE3 791 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 NANOGNBQ7Z5D8 188 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 GTF2IRD2Q86UP8 949 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 DENND6AQ8IWF6 608 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 AQP12AQ8IXF9 295 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 MAGEE2Q8TD90 523 aaPredicted RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 RNF139Q8WU17 664 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 ZC3H15Q8WU90 426 aaKnown RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 CCDC97Q96F63 343 aaPredicted RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 MRPL46Q9H2W6 279 aaKnown RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 GPN2Q9H9Y4 310 aaPredicted RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 MAP10Q9P2G4 905 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 ABCD2Q9UBJ2 740 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 VPS51Q9UID3 782 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 ACOT9Q9Y305 439 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 TRAF6Q9Y4K3 522 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 ACKR2O00590 384 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 HCRTO43612 131 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 SYNCRIPO60506 623 aaKnown RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 ALDOCP09972 364 aaKnown RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 STAG3L1P0CL83 205 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 UBA1P22314 1058 aaKnown RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 EEF1B2P24534 225 aaKnown RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 CD68P34810 354 aaPredicted RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 RPS9P46781 194 aaKnown RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 ATP6V0D1P61421 351 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 CAPRIN1Q14444 709 aaKnown RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 PYCR3Q53H96 274 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 TMTC4Q5T4D3 741 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 LCN8Q6JVE9 175 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 DNAJC14Q6Y2X3 702 aaPredicted RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 RAB2BQ8WUD1 216 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 SH3YL1Q96HL8 342 aaPredicted RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 ZNF347Q96SE7 839 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms