RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 VPS39Q96JC1 886 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 MCMBPQ9BTE3 642 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 GDE1Q9NZC3 331 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 SLC17A7Q9P2U7 560 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 DCDC2Q9UHG0 476 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 ARL5AQ9Y689 179 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 C2orf81A6NN90 581 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 ADH1CP00326 375 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 PDHA1P08559 390 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 POLD2P49005 469 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 EPHB1P54762 984 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 SNRPD1P62314 119 aaKnown RBP15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 CTBP1Q13363 440 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 TAF1AQ15573 450 aaPredicted RBP15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 FAM78AQ5JUQ0 283 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 ARMC12Q5T9G4 340 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 AHI1Q8N157 1196 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 BPIFB1Q8TDL5 484 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 FGF13Q92913 245 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 ASB16Q96NS5 453 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 FAM111AQ96PZ2 611 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 VPS11Q9H270 941 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 MFSD1Q9H3U5 465 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 NSUN3Q9H649 340 aaKnown RBP15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 SNX15Q9NRS6 342 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 HACD3Q9P035 362 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 GRID1Q9ULK0 1009 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 PLLPQ9Y342 182 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 GLRA3O75311 464 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 RPP40O75818 363 aaKnown RBP15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 AHSGP02765 367 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 PRKCGP05129 697 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 MPOP05164 745 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 PIRTP0C851 137 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 SRCP12931 536 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 DRD4P21917 467 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 SLC1A2P43004 574 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 ETV4P43268 484 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 GRIA4P48058 902 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 RPL26P61254 145 aaKnown RBP15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 ECT2LQ008S8 904 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 BCL2L1Q07817 233 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 ILF2Q12905 390 aaKnown RBP15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 DHCR24Q15392 516 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 ASTLQ6HA08 431 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 RGS9BPQ6ZS82 235 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 DENND6AQ8IWF6 608 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 LRRC34Q8IZ02 419 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 OTUD6BQ8N6M0 293 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 OR2AP1Q8NGE2 309 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 LRRC8CQ8TDW0 803 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 HDAC10Q969S8 669 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 RPL10LQ96L21 214 aaKnown RBP15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 GPR22Q99680 433 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 CEP44Q9C0F1 390 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 ATP13A3Q9H7F0 1226 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 GGT7Q9UJ14 662 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 FBXO5Q9UKT4 447 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 RPL26L1Q9UNX3 145 aaKnown RBP15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 MTO1Q9Y2Z2 717 aaKnown RBP15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 PCDHB9Q9Y5E1 797 aa15.79■□□□□ 0.12
HERPUD1-201ENST00000300302 TRANK1O15050 2925 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 FZD6O60353 706 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 SOCS5O75159 536 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 VIPR2P41587 438 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 CTSOP43234 321 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 MAGEA12P43365 314 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 CD151P48509 253 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 PDE1CQ14123 709 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 INSCQ1MX18 579 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 GKAP1Q5VSY0 366 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 KYAT3Q6YP21 454 aaKnown RBP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 GET4Q7L5D6 327 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 GALNT7Q86SF2 657 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 RYBPQ8N488 228 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 EFHBQ8N7U6 833 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 MYO19Q96H55 970 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 OBP2AQ9NY56 170 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 EVLQ9UI08 416 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 KCTD3Q9Y597 815 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 ANKRD36A6QL64 1941 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 C2orf16Q68DN1 1984 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 PGLSO95336 258 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 NFATC1O95644 943 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 GLP2RO95838 553 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 DHRS4L1P0CG22 281 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 ADH5P11766 374 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 POLR2EP19388 210 aaKnown RBP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 STK19P49842 368 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 MPP1Q00013 466 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 GRM3Q14832 879 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 QPCTQ16769 361 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 EML3Q32P44 896 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 ACCSLQ4AC99 568 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 DGKKQ5KSL6 1271 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 ANKRD54Q6NXT1 300 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 C22orf39Q6P5X5 142 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 CDHR3Q6ZTQ4 885 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 PTAR1Q7Z6K3 402 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms