RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 SUV39H2Q9H5I1 410 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 SMYD2Q9NRG4 433 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 EURLQ9NYK6 297 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 VPS18Q9P253 973 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 EXOC1LA0A1B0GW35 172 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 ANTXRLA6NF34 631 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 FAM159BA6NKW6 160 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 BNIP3LO60238 219 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 PAPSS2O95340 614 aaPredicted RBP24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 SLC8A1P32418 973 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 CTHP32929 405 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 RECQLP46063 649 aaPredicted RBP24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 KLHL38Q2WGJ6 581 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 PUS10Q3MIT2 529 aaKnown RBP24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 KRT71Q3SY84 523 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 NUDT18Q6ZVK8 323 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 TDRPQ86YL5 185 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 ARL8AQ96BM9 186 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 ZNF669Q96BR6 464 aaPredicted RBP24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 HEPHQ9BQS7 1158 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 PPCSQ9HAB8 311 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 MED4Q9NPJ6 270 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 WASF2Q9Y6W5 498 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 SPECC1L-ADORA2AF8WAN1 911 aa24.77■■□□□ 1.56
GTF2A1-201ENST00000298173 TNFRSF4P43489 277 aa24.77■■□□□ 1.56
GTF2A1-201ENST00000298173 GPS2Q13227 327 aa24.77■■□□□ 1.56
GTF2A1-201ENST00000298173 RASA2Q15283 850 aa24.77■■□□□ 1.56
GTF2A1-201ENST00000298173 HNRNPA1L2Q32P51 320 aaKnown RBP24.77■■□□□ 1.56
GTF2A1-201ENST00000298173 TXNDC11Q6PKC3 985 aa24.77■■□□□ 1.56
GTF2A1-201ENST00000298173 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.77■■□□□ 1.56
GTF2A1-201ENST00000298173 EZH1Q92800 747 aaPredicted RBP24.77■■□□□ 1.56
GTF2A1-201ENST00000298173 SLC24A2Q9UI40 661 aa24.77■■□□□ 1.56
GTF2A1-201ENST00000298173 SPO11Q9Y5K1 396 aa24.77■■□□□ 1.56
GTF2A1-201ENST00000298173 TCF20Q9UGU0 1960 aaKnown RBP24.77■■□□□ 1.56
GTF2A1-201ENST00000298173 F5P12259 2224 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 CXorf49A8MYA2 514 aaPredicted RBP24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 H3BQF6 201 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 PIAS1O75925 651 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 PRKCGP05129 697 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 ASGR2P07307 311 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 IVLP07476 585 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 MYZAPP0CAP1 466 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 BMP1P13497 986 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 HNRNPLP14866 589 aaKnown RBP eCLIP24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 GRIA4P48058 902 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 ENPP2Q13822 863 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 EFTUD2Q15029 972 aaKnown RBP eCLIP24.76■■□□□ 1.551e-6■■■□□ 15
GTF2A1-201ENST00000298173 TSTD2Q5T7W7 516 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 ESRP1Q6NXG1 681 aaKnown RBP24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 NLRP9Q7RTR0 991 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 RALGPS2Q86X27 583 aaPredicted RBP24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 ZSWIM9Q86XI8 627 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 MDGA1Q8NFP4 955 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 PEX13Q92968 403 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 LRIG1Q96JA1 1093 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 SMIM14Q96QK8 99 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 ZDHHC6Q9H6R6 413 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 RIMKLBQ9ULI2 386 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 PPIL1Q9Y3C6 166 aa24.76■■□□□ 1.55
GTF2A1-201ENST00000298173 TLDC2A0PJX2 215 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 K7EQS6 105 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 PIRTP0C851 137 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 SLCO1A2P46721 670 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 LAMB3Q13751 1172 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 FNDC3BQ53EP0 1204 aaKnown RBP24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 TNFAIP8L3Q5GJ75 292 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 C9orf64Q5T6V5 341 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 ZNF366Q8N895 744 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 BLOC1S5Q8TDH9 187 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 PGM2Q96G03 612 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 CERS2Q96G23 380 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 C8orf33Q9H7E9 229 aaPredicted RBP24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 SLC2A6Q9UGQ3 507 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 EDDM13A0A1B0GTR0 161 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 LOC730098B7Z3J9 87 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 POC1B-GALNT4F8VUJ3 575 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 CTSLP07711 333 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 CHRM1P11229 460 aaPredicted RBP24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 IL9P15248 144 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 PSMA3P25788 255 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 IL12RB1P42701 662 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 ARCN1P48444 511 aaKnown RBP24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 CNGA3Q16281 694 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 EMC10Q5UCC4 262 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 EGFLAMQ63HQ2 1017 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 ADGRD1Q6QNK2 874 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 GDPD4Q6W3E5 623 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 MAGEE1Q9HCI5 957 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 HEBP1Q9NRV9 189 aa24.75■■□□□ 1.55
GTF2A1-201ENST00000298173 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.75■■□□□ 1.555e-7■■■■■ 36.4
GTF2A1-201ENST00000298173 A0A0J9YYE9 177 aa24.74■■□□□ 1.55
GTF2A1-201ENST00000298173 A0A1W2PQ67 120 aa24.74■■□□□ 1.55
GTF2A1-201ENST00000298173 AURKAO14965 403 aa24.74■■□□□ 1.55
GTF2A1-201ENST00000298173 CDH16O75309 829 aa24.74■■□□□ 1.55
GTF2A1-201ENST00000298173 TRBC1P01850 177 aa24.74■■□□□ 1.55
GTF2A1-201ENST00000298173 HLA-EP13747 358 aa24.74■■□□□ 1.55
GTF2A1-201ENST00000298173 ARNTP27540 789 aa24.74■■□□□ 1.55
GTF2A1-201ENST00000298173 KIR2DL1P43626 348 aaPredicted RBP24.74■■□□□ 1.55
GTF2A1-201ENST00000298173 TFF2Q03403 129 aa24.74■■□□□ 1.55
GTF2A1-201ENST00000298173 ACVR1Q04771 509 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms