RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 MAP3K7O43318 606 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 DLX3O60479 287 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 SRP72O76094 671 aaKnown RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 EOMESO95936 686 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 JUNP05412 331 aaKnown RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 GALTP07902 379 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 TYMPP19971 482 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 RPL14P50914 215 aaKnown RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 TLE2Q04725 743 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 SCAPQ12770 1279 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 TBL3Q12788 808 aaKnown RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 CDH18Q13634 790 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 PREPLQ4J6C6 727 aaPredicted RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 SGO1Q5FBB7 561 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 SIRPB2Q5JXA9 342 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 ATXN7L2Q5T6C5 722 aaPredicted RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 TXNDC8Q6A555 127 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 GALNT4Q8N4A0 578 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 RAB3IL1Q8TBN0 382 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 ACMSDQ8TDX5 336 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 ZNF296Q8WUU4 475 aaPredicted RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 SKA1Q96BD8 255 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 FCRL5Q96RD9 977 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 NPAS2Q99743 824 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 GORASP1Q9BQQ3 440 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 GPR63Q9BZJ6 419 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 POLR1EQ9GZS1 481 aaKnown RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 SMG9Q9H0W8 520 aaKnown RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 DCLRE1BQ9H816 532 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 TMEM161AQ9NX61 479 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 CDYLQ9Y232 598 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 VWA7Q9Y334 891 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 V9GYQ6 96 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 TM4SF4P48230 202 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 HCAR3P49019 387 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 DSC3Q14574 896 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 VEPH1Q14D04 833 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 TRIP10Q15642 601 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 GLT6D1Q7Z4J2 308 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 ARL14EPQ8N8R7 260 aaPredicted RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 MAB21L3Q8N8X9 362 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 PPWD1Q96BP3 646 aaKnown RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 CMTM5Q96DZ9 223 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 PGAP3Q96FM1 320 aaPredicted RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 NAF1Q96HR8 494 aaKnown RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 SEMA4BQ9NPR2 832 aaPredicted RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 SCUBE2Q9NQ36 999 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 NDE1Q9NXR1 346 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 BTRCQ9Y297 605 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 TLR6Q9Y2C9 796 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 C2orf78A6NCI8 922 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 SLC38A8A6NNN8 435 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 IQCF5A8MTL0 148 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 TNFRSF10BO14763 440 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 INPPL1O15357 1258 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 STX7O15400 261 aaKnown RBP9.35□□□□□ -0.91
PRDM9-201ENST00000296682 TPST1O60507 370 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 TBX10O75333 385 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 CABYRO75952 493 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 GUCA1CO95843 209 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 SERPINA6P08185 405 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 RHOQP17081 205 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 LSM12Q3MHD2 195 aaKnown RBP9.35□□□□□ -0.91
PRDM9-201ENST00000296682 AGKQ53H12 422 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 HECTD3Q5T447 861 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 AGAP9Q5VTM2 703 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 ATG14Q6ZNE5 492 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 ARHGAP18Q8N392 663 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 OR6Y1Q8NGX8 325 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 RCN3Q96D15 328 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 TMEM39AQ9NV64 488 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.35□□□□□ -0.91
PRDM9-201ENST00000296682 SLC7A8Q9UHI5 535 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 FCF1Q9Y324 198 aaKnown RBP9.35□□□□□ -0.91
PRDM9-201ENST00000296682 TET1Q8NFU7 2136 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 CCDC160A6NGH7 325 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 ZBTB14O43829 449 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 PSMG1O95456 288 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 GOT2P00505 430 aaKnown RBP9.35□□□□□ -0.91
PRDM9-201ENST00000296682 SLC35E2BP0CK96 405 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 FOXD4Q12950 439 aaPredicted RBP9.35□□□□□ -0.91
PRDM9-201ENST00000296682 HNRNPDQ14103 355 aaKnown RBP9.35□□□□□ -0.91
PRDM9-201ENST00000296682 HSF5Q4G112 596 aaPredicted RBP9.35□□□□□ -0.91
PRDM9-201ENST00000296682 HECTD2Q5U5R9 776 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 POTEHQ6S545 545 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 FRMD7Q6ZUT3 714 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 SLC45A3Q96JT2 553 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 APOL5Q9BWW9 433 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 CDH19Q9H159 772 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 SLC25A51Q9H1U9 297 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 MRPL46Q9H2W6 279 aaKnown RBP9.35□□□□□ -0.91
PRDM9-201ENST00000296682 UBA2Q9UBT2 640 aaPredicted RBP9.35□□□□□ -0.91
PRDM9-201ENST00000296682 MID2Q9UJV3 735 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 DNMT3LQ9UJW3 386 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 NYNRINQ9P2P1 1898 aaKnown RBP9.35□□□□□ -0.91
PRDM9-201ENST00000296682 CCDC162PA2VCL2 907 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 TBL1XO60907 577 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 KATNA1O75449 491 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 TRIM16O95361 564 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 C1RP00736 705 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms