RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 ZNF805Q5CZA5 627 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 PPP1R21Q6ZMI0 780 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 PCGF5Q86SE9 256 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 CAND1Q86VP6 1230 aaKnown RBP15.25■□□□□ 0.03
CCDC140-201ENST00000295226 TMIEQ8NEW7 156 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 PIH1D2Q8WWB5 315 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 ART4Q93070 314 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 RMDN1Q96DB5 314 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 FEM1CQ96JP0 617 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 HHIPQ96QV1 700 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 RUFY1Q96T51 708 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 OSBPL6Q9BZF3 934 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 CHRDQ9H2X0 955 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 CD93Q9NPY3 652 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 FAM114A2Q9NRY5 505 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 GOLGA6AQ9NYA3 693 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 PSMD3O43242 534 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 SUN1O94901 812 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 NDST3O95803 873 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 ALPIP09923 528 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 ALADP13716 330 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 TIMP2P16035 220 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 SESN2P58004 480 aaPredicted RBP15.25■□□□□ 0.03
CCDC140-201ENST00000295226 CRADDP78560 199 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 HLTFQ14527 1009 aaKnown RBP eCLIP15.25■□□□□ 0.03
CCDC140-201ENST00000295226 MORF4L2Q15014 288 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 CST6Q15828 149 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 QPCTQ16769 361 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 HP1BP3Q5SSJ5 553 aaPredicted RBP15.25■□□□□ 0.03
CCDC140-201ENST00000295226 FNBP1LQ5T0N5 605 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 CFAP58Q5T655 872 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 ZNF771Q7L3S4 317 aaPredicted RBP15.25■□□□□ 0.03
CCDC140-201ENST00000295226 PARS2Q7L3T8 475 aaKnown RBP15.25■□□□□ 0.03
CCDC140-201ENST00000295226 SYT13Q7L8C5 426 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 DNAAF3Q8N9W5 541 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 HMGB4Q8WW32 186 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 ECHDC3Q96DC8 303 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 ZNF641Q96N77 438 aaPredicted RBP15.25■□□□□ 0.03
CCDC140-201ENST00000295226 EPHX3Q9H6B9 360 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 EIF2B3Q9NR50 452 aaKnown RBP15.25■□□□□ 0.03
CCDC140-201ENST00000295226 ZDHHC18Q9NUE0 388 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 SERGEFQ9UGK8 458 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 NFU1Q9UMS0 254 aa15.25■□□□□ 0.03
CCDC140-201ENST00000295226 C16orf96A6NNT2 1141 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 GOLGA8KD6RF30 607 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 ALOX15BO15296 676 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 RNASEH1O60930 286 aaKnown RBP15.24■□□□□ 0.03
CCDC140-201ENST00000295226 SOCS5O75159 536 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 GABRG2P18507 467 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 NDUFV2P19404 249 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 ECHS1P30084 290 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 PXNP49023 591 aaPredicted RBP15.24■□□□□ 0.03
CCDC140-201ENST00000295226 EPHB1P54762 984 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 GRM3Q14832 879 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 MSS51Q4VC12 460 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 TMEM31Q5JXX7 168 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 CERCAMQ5T4B2 595 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 ZNF776Q68DI1 518 aaPredicted RBP15.24■□□□□ 0.03
CCDC140-201ENST00000295226 NAPEPLDQ6IQ20 393 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 KIAA1324Q6UXG2 1013 aaKnown RBP15.24■□□□□ 0.03
CCDC140-201ENST00000295226 DSG4Q86SJ6 1040 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 AADATQ8N5Z0 425 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 MRGPRX1Q96LB2 322 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 SERPINB12Q96P63 405 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 PPP1R2P1Q96PQ5 205 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 OSBPL1AQ9BXW6 950 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 CASS4Q9NQ75 786 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 DLGAP2Q9P1A6 1054 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 VPS18Q9P253 973 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 ADAM21Q9UKJ8 722 aa15.24■□□□□ 0.03
CCDC140-201ENST00000295226 ZDBF2Q9HCK1 2354 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 A0A1W2PP55 124 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 ERI2A8K979 691 aaKnown RBP15.23■□□□□ 0.03
CCDC140-201ENST00000295226 ANKRD66B4E2M5 251 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 C1QTNF3-AMACRE9PGA6 284 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 ATG13O75143 517 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 SYF2O95926 243 aaKnown RBP15.23■□□□□ 0.03
CCDC140-201ENST00000295226 CPP00450 1065 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 ABL2P42684 1182 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 RPS9P46781 194 aaKnown RBP15.23■□□□□ 0.03
CCDC140-201ENST00000295226 CNTN1Q12860 1018 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 NUMA1Q14980 2115 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 SLC14A2Q15849 920 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 ANO7Q6IWH7 933 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 TTC7BQ86TV6 843 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 HOOK3Q86VS8 718 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 AGGF1Q8N302 714 aaeCLIP15.23■□□□□ 0.03
CCDC140-201ENST00000295226 PGBD3Q8N328 593 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 MPP5Q8N3R9 675 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 HDDC3Q8N4P3 179 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 BBOF1Q8ND07 529 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 GANCQ8TET4 914 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 SIPA1Q96FS4 1042 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 LRIG1Q96JA1 1093 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 SHOC2Q9UQ13 582 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 SPO11Q9Y5K1 396 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 CACNA1IQ9P0X4 2223 aa15.23■□□□□ 0.03
CCDC140-201ENST00000295226 CCDC78A2IDD5 438 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 GOLGA8CPA6NN73 597 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 EPOP01588 193 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms