RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 APOC4-APOC2K7ER74 178 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 APOC2P02655 101 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 CYP1A1P04798 512 aaPredicted RBP16.2■□□□□ 0.18
SSRP1-202ENST00000293880 ADRB2P07550 413 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 POLR2EP19388 210 aaKnown RBP16.2■□□□□ 0.18
SSRP1-202ENST00000293880 TFEBP19484 476 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 GNA13Q14344 377 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 ZNF846Q147U1 533 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 TCEAL5Q5H9L2 206 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 PCID2Q5JVF3 399 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 BHLHB9Q6PI77 547 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 TRIM74Q86UV6 250 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 TRIM73Q86UV7 250 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 ING5Q8WYH8 240 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 TMEM216Q9P0N5 145 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 A0A1W2PQ72 361 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 LOC110117498-PIK3R3F6TDL0 507 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 SLC28A2O43868 658 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 PRKAR1AP10644 381 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 RAET1GQ6H3X3 334 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 USP45Q70EL2 814 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 MYOCQ99972 504 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 KCNS3Q9BQ31 491 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 FNDC11Q9BVV2 318 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 POLR1EQ9GZS1 481 aaKnown RBP16.2■□□□□ 0.18
SSRP1-202ENST00000293880 RASSF1Q9NS23 344 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 ING3Q9NXR8 418 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 ENOPH1Q9UHY7 261 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 SAMHD1Q9Y3Z3 626 aaKnown RBP16.2■□□□□ 0.18
SSRP1-202ENST00000293880 TBL1XO60907 577 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 GOT1P17174 413 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 AQP1P29972 269 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 TRAP1Q12931 704 aaKnown RBP16.2■□□□□ 0.18
SSRP1-202ENST00000293880 LIN54Q6MZP7 749 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 FERD3LQ96RJ6 166 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 TM6SF2Q9BZW4 377 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 C12orf65Q9H3J6 166 aaKnown RBP16.2■□□□□ 0.18
SSRP1-202ENST00000293880 FBXO44Q9H4M3 255 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 CNTNAP4Q9C0A0 1308 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 PSMD9O00233 223 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 PIK3CGP48736 1102 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 PACS1Q6VY07 963 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 OTOP1Q7RTM1 612 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 OR8H3Q8N146 312 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 ATG10Q9H0Y0 220 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 CUEDC1Q9NWM3 386 aaPredicted RBP16.2■□□□□ 0.18
SSRP1-202ENST00000293880 RPL22P35268 128 aaKnown RBP16.2■□□□□ 0.18
SSRP1-202ENST00000293880 TAS2R41P59536 307 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 COPZ1P61923 177 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 BST1Q10588 318 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 CERS2Q96G23 380 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 TBCBQ99426 244 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 ATXN10Q9UBB4 475 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 OR12D3Q9UGF7 316 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 PCDHB12Q9Y5F1 795 aa16.2■□□□□ 0.18
SSRP1-202ENST00000293880 STAT5AP42229 794 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 RPS6KA3P51812 740 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 ACLYP53396 1101 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 TRIM28Q13263 835 aaKnown RBP16.19■□□□□ 0.18
SSRP1-202ENST00000293880 MAPKAPK3Q16644 382 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 TTC27Q6P3X3 843 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 RALGPS2Q86X27 583 aaPredicted RBP16.19■□□□□ 0.18
SSRP1-202ENST00000293880 DSELQ8IZU8 1212 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 SAMD3Q8N6K7 520 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 PIWIL2Q8TC59 973 aaKnown RBP16.19■□□□□ 0.18
SSRP1-202ENST00000293880 ATL1Q8WXF7 558 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 ZNF354BQ96LW1 612 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 PLCL2Q9UPR0 1127 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 ERGIC3Q9Y282 383 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 TEX47Q8TBZ9 253 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 SLC38A2Q96QD8 506 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 HES2Q9Y543 173 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 ZNF24P17028 368 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 NAB1Q13506 487 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 WSCD1Q658N2 575 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 LRRC20Q8TCA0 184 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 TRNT1Q96Q11 434 aaKnown RBP16.19■□□□□ 0.18
SSRP1-202ENST00000293880 PANX3Q96QZ0 392 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 TSPAN18Q96SJ8 248 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 CDK5RAP1Q96SZ6 601 aaKnown RBP16.19■□□□□ 0.18
SSRP1-202ENST00000293880 CDH19Q9H159 772 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 EQTNQ9NQ60 294 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.19■□□□□ 0.18
SSRP1-202ENST00000293880 H3BRB1 525 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 OR10H2O60403 315 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 HNMTP50135 292 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 ARPC4P59998 168 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 PPP3CAQ08209 521 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 FBXL19Q6PCT2 694 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 METTL7BQ6UX53 244 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 ZDHHC17Q8IUH5 632 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 CXorf40AQ8TE69 158 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 TUT1Q9H6E5 874 aaKnown RBP16.19■□□□□ 0.18
SSRP1-202ENST00000293880 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.19■□□□□ 0.182e-6■■■□□ 15.9
SSRP1-202ENST00000293880 ZNF221Q9UK13 617 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 RGSL1A5PLK6 1076 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 EPHB6O15197 1021 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 ECDO95905 644 aaPredicted RBP16.19■□□□□ 0.18
SSRP1-202ENST00000293880 RAB10P61026 200 aa16.19■□□□□ 0.18
SSRP1-202ENST00000293880 IRF8Q02556 426 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms