RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 NXNL1Q96CM4 212 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 CINPQ9BW66 212 aaPredicted RBP12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 COLEC11Q9BWP8 271 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 RIBC2Q9H4K1 309 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 GPBP1L1Q9HC44 474 aaPredicted RBP12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 ST3GAL5Q9UNP4 418 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 TFEBP19484 476 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 TPSB2P20231 275 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 PEX2P28328 305 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 TBX4P57082 545 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 ARPC4P59998 168 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 TPSAB1Q15661 275 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 TIGD7Q6NT04 549 aaPredicted RBP12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 MAB21L3Q8N8X9 362 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 GTF3C2Q8WUA4 911 aaPredicted RBP12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 CDH19Q9H159 772 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 EPB41L1Q9H4G0 881 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 EBF2Q9HAK2 575 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 SEMA4BQ9NPR2 832 aaPredicted RBP12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 MATN2O00339 956 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 H2AFYO75367 372 aaKnown RBP12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 GCATO75600 419 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 SMPD1P17405 629 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 CNPY1Q3B7I2 92 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 PCID2Q5JVF3 399 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 ATP6V0D2Q8N8Y2 350 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 FCRL2Q96LA5 508 aaPredicted RBP12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 SLC4A5Q9BY07 1137 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 RWDD3Q9Y3V2 267 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 EFCAB10A6NFE3 127 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 FAM25AB3EWG3 89 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 FAM25CB3EWG5 89 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 FAM25GB3EWG6 89 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 PSMD12O00232 456 aaPredicted RBP12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 RAMP2O60895 175 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 LRIG2O94898 1065 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 TGDSO95455 350 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 NADKO95544 446 aaPredicted RBP12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 GUCA1CO95843 209 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 MMP3P08254 477 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 RENBPP51606 427 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 RALGDSQ12967 914 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 PAGE2BQ5JRK9 111 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 GK5Q6ZS86 529 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 DLG3Q92796 817 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 RNFT2Q96EX2 444 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 COX4I2Q96KJ9 171 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 KLHL32Q96NJ5 620 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 KLHL3Q9UH77 587 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 BTRCQ9Y297 605 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 STRCP1A6NGW2 1772 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 RGSL1A5PLK6 1076 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 NEMP2A6NFY4 417 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 HIST1H2AGP0C0S8 130 aaPredicted RBP12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 HIST1H2ADP20671 130 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 LRPAP1P30533 357 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 FMO4P31512 558 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 SRP54P61011 504 aaKnown RBP12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 TARBP2Q15633 366 aaKnown RBP12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 DDR2Q16832 855 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 TEX44Q53QW1 395 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 RAP1GAP2Q684P5 730 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 TREML1Q86YW5 311 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 HIST1H2AHQ96KK5 128 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 CAMKK2Q96RR4 588 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 HIST1H2AJQ99878 128 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 TSEN34Q9BSV6 310 aaKnown RBP12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 H2AFJQ9BTM1 129 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 CLK4Q9HAZ1 481 aaKnown RBP12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 TRMT6Q9UJA5 497 aaKnown RBP12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 TPRKBQ9Y3C4 175 aa12.62□□□□□ -0.39
SLC6A1-201ENST00000287766 PRIM2P49643 509 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 RAB27AP51159 221 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 ZNF132P52740 706 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 ADAM17P78536 824 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 MOGSQ13724 837 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 SPDYE7PQ495Y7 208 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 AARS2Q5JTZ9 985 aaKnown RBP12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 CAND1Q86VP6 1230 aaKnown RBP12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 SSU72Q9NP77 194 aaKnown RBP12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 CDH22Q9UJ99 828 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 GNEQ9Y223 722 aaKnown RBP12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 DDX60Q8IY21 1712 aaKnown RBP12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 IL12AP29459 219 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 CXCR3P49682 368 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 IDH3AP50213 366 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 NEK3P51956 506 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 HK2P52789 917 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 ABATP80404 500 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 ZSWIM7Q19AV6 140 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 C6orf52Q5T4I8 152 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 ESRP1Q6NXG1 681 aaKnown RBP12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 LPCAT1Q8NF37 534 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 TRIM8Q9BZR9 551 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 KRT84Q9NSB2 600 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 PNPLA3Q9NST1 481 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 EGFL7Q9UHF1 273 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 PPM1HQ9ULR3 514 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 RAP2CQ9Y3L5 183 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms