RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 APBB2Q92870 758 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 TMA16Q96EY4 203 aaKnown RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 IMP4Q96G21 291 aaKnown RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 FAM8A1Q9UBU6 413 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 FCF1Q9Y324 198 aaKnown RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 CCDC162PA2VCL2 907 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 H7C4K7 107 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 ACSL4O60488 711 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 PEX11BO96011 259 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 PTDSS1P48651 473 aaKnown RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 PKNOX1P55347 436 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 DEFB103AP81534 67 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 CYP4F8P98187 520 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 NAB1Q13506 487 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 FAM83EQ2M2I3 478 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 ZRANB3Q5FWF4 1079 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 LRRC73Q5JTD7 316 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 HABP4Q5JVS0 413 aaKnown RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 HECTD2Q5U5R9 776 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 KDELC1Q6UW63 502 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 TRIM67Q6ZTA4 783 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 GLT6D1Q7Z4J2 308 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 SNX32Q86XE0 403 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 HPS6Q86YV9 775 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 MAB21L3Q8N8X9 362 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 OR13J1Q8NGT2 312 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 PXYLP1Q8TE99 480 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 RPL10LQ96L21 214 aaKnown RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 LENG8Q96PV6 779 aaPredicted RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 CDH19Q9H159 772 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 CCDC68Q9H2F9 335 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 TLR9Q9NR96 1032 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 TMEM248Q9NWD8 314 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 OXSMQ9NWU1 459 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 NCKIPSDQ9NZQ3 722 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 UBA2Q9UBT2 640 aaPredicted RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 GIMAP2Q9UG22 337 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 SSX2IPQ9Y2D8 614 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 C15orf41Q9Y2V0 281 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 EYSQ5T1H1 3165 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 PRUNE2Q8WUY3 3088 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 ZNF840PA6NDX5 716 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 K7ERQ8 282 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 PPP6CO00743 305 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 TBL1XO60907 577 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 GLP2RO95838 553 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 MMP2P08253 660 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 GFAPP14136 432 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 MZF1P28698 734 aaPredicted RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 ADRA1AP35348 466 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 NDST2P52849 883 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 CDKN2DP55273 166 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 ELAVL2Q12926 359 aaKnown RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 PDAP1Q13442 181 aaKnown RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 EIF4EBP2Q13542 120 aaPredicted RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 CDH18Q13634 790 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 LSM12Q3MHD2 195 aaKnown RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 FSCBQ5H9T9 825 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 TMCO4Q5TGY1 634 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 LIPMQ5VYY2 423 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 RIPOR1Q6ZS17 1223 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 FRMD7Q6ZUT3 714 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 ULK2Q8IYT8 1036 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 BBS5Q8N3I7 341 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 ARRDC2Q8TBH0 407 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 DDI1Q8WTU0 396 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 DPF3Q92784 378 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 RSRC1Q96IZ7 334 aaKnown RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 SLC45A3Q96JT2 553 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 C1orf74Q96LT6 269 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 YME1L1Q96TA2 773 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 CLSTN3Q9BQT9 956 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 MRPL46Q9H2W6 279 aaKnown RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 OLA1Q9NTK5 396 aaKnown RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 MKS1Q9NXB0 559 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 CLIC5Q9NZA1 410 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 SLC7A8Q9UHI5 535 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 VWA7Q9Y334 891 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 PCDHB9Q9Y5E1 797 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 PCDHB12Q9Y5F1 795 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 PTGDR2Q9Y5Y4 395 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 SQORQ9Y6N5 450 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 IQCF5A8MTL0 148 aa6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 RHOBTB1O94844 696 aa6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 SBK3P0C264 359 aa6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 TPBGLP0DKB5 382 aa6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 CCL5P13501 91 aa6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 CSF2RAP15509 400 aa6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 WEE1P30291 646 aa6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 HOXC13P31276 330 aa6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 HADHAP40939 763 aa6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 MAGEA11P43364 429 aa6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 RPL14P50914 215 aaKnown RBP6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 IKBKEQ14164 716 aa6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 VEPH1Q14D04 833 aa6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 PFKFB4Q16877 469 aa6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 INSCQ1MX18 579 aa6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 PREPLQ4J6C6 727 aaPredicted RBP6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 MSANTD2Q6P1R3 559 aa6.07□□□□□ -1.44
TNFSF4-201ENST00000281834 KLC3Q6P597 504 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms